Brassica oleracea (wild cabbage): 106311821
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Entry
106311821 CDS
T04124
Name
(RefSeq) nuclear poly(A) polymerase 1-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106311821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106311821
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
106311821
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
106311821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
106311821
NCBI-ProteinID:
XP_013604573
UniProt:
A0A0D3DWQ8
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All DBs
Position
C8:36683465..36687722
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AA seq
711 aa
AA seq
DB search
MASVQQNGQRYGITEPISLGGPTELDVVKTRELEKYLQDVGLYESKEEAVRREEVLGRLD
QIVKTWIKTISRAKGLNDQLLHEANAEIFTFGSYRLGVHGPGADIDTLCVGPRHATREGD
FFGELQRMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPKDLDISQDS
ILQNADEQTVRSLNGCRVTDQILRLVPNIENFRTTLRCMRFWAKRRGVYSNVSGFLGGIN
WALLVARICQLYPNALPNMLASRFFRVYTQWRWPNPVLLCSMDEGSLGLQVWDPRRNPKD
RLHMMPIITPAYPCMNSSYNVSASTLRIMTGEFQRGKDICEAMEANKADWDTLFEPFAFF
EAYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASRP
LHCSYFMGLQRKQGVPAAEGEPFDIRRTVEEFKHTVNGYMLWIPGMEISVSHIKRRSLPS
FVFPGGVRPSHASKGTWDSKRRAEHRVSSTASAATTTTATTTNEASSESKAGSNSPGDEK
KRKRGDDETLADQLRNSKHVAVPVPTENGEGGSPDPSVGSICSSPLKDSCTNGKSDPINK
DPQENAVVLSKEDAPESHPIEKIATPQAPTSEETEELEGNSFDFGNQVTATATIPPFEAT
TSNGSPFSNEALEELEVVPMRQPEVTHRASVQQRKPIIKLNFTSLGKTNGK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgtccagcagaatgggcagaggtatggtattacagaacctatctctctggga
ggaccaacggagcttgatgtggtcaagacacgagagctcgagaagtatttgcaagatgtt
ggattgtacgagagtaaggaggaagctgttagaagggaggaggttcttgggagacttgat
cagattgtgaaaacatggataaaaacaatcagccgcgccaaagggttgaatgatcagctg
cttcatgaggctaacgccgagatatttactttcggttcttatcggctaggggtacatgga
cctggtgctgatatagacactttatgtgtggggcctagacatgcaactagagaaggtgat
ttctttggtgagctgcaaaggatgctgtccgaaatgcctgaagtaaccgagcttcaccct
gtgcctgatgctcatgttcccttgatgggattcaaacttaatggagtttctatagatctc
ctctatgcacaacttccgctctgggttatacctaaggacttggatatatcacaggattcc
attctacagaatgctgatgagcaaactgtccgaagcctcaacggttgtagagttactgac
cagatcttgcgtctggttcctaacattgagaatttcagaacaacattaagatgcatgcgg
ttttgggccaagcgacgtggagtatactctaatgtctctggatttcttggtggtataaac
tgggcattgcttgtagctcggatatgtcaactgtatcctaacgctctcccaaatatgttg
gcgtctcggttctttagggtctacactcaatggcgttggccgaatccagtccttctttgt
tctatggatgaaggatccctcggtcttcaagtttgggatcctagaagaaaccccaaagac
cggttgcacatgatgcccatcattacccctgcttatccttgtatgaactcaagttacaat
gtctctgcaagtacgttgcggattatgacaggagagtttcagagaggcaaagatatatgt
gaggctatggaagcgaacaaagctgactgggatactctctttgagccatttgcattcttt
gaagcgtataaaaactatcttcagatcgacatctctgccgctaatgtcgatgatttaaga
aagtggaaaggatgggttgagtctcgtctcagacagctcacactgaagattgagagacat
acttatgacatgcttcaatgccaccctcatccacacgactttcaagatgcatcccgaccg
cttcactgctcttacttcatgggtctgcagcgcaaacaaggagttccagcagccgaaggc
gagccgtttgatatcagaagaactgttgaggagtttaaacacactgttaacggttacatg
ttgtggattcccgggatggagattagtgtcagccatataaagcgaaggagtctaccgagc
tttgtgtttcctggtggtgttagaccttcgcatgcctctaaaggaacatgggacagcaaa
cgccgcgcagagcatagagtttcttctacagcaagtgcagctactactactactgcaaca
acaacaaatgaagcgagttctgaaagtaaagctggttccaacagtccaggagatgagaag
aagagaaaacggggagatgatgagacactcgcggatcagttaaggaactctaaacacgtg
gctgttccagtgcctactgagaatggtgaaggcgggagcccggatccatctgttggatcc
atttgctctagtcctttgaaagatagctgtacaaacggtaaatctgatcccattaataag
gatccacaagagaatgcagttgttttgagtaaggaggatgcaccagagagtcatccaata
gagaagatagccactcctcaagctcctactagtgaagaaacagaggagcttgaaggcaac
agctttgacttcggaaaccaagtcactgccactgcaactatacctccattcgaggccact
acgtcaaatggctcaccattctccaatgaagcactggaagaactcgaggttgttccaatg
cgacagcctgaggtgacgcatagagcttcagtgcagcagcgaaaaccgataatcaaattg
aacttcacgtctctaggcaaaaccaatggcaagtaa
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