Brassica oleracea (wild cabbage): 106311845
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Entry
106311845 CDS
T04124
Name
(RefSeq) myosin-5 isoform X1
KO
K10357
myosin V
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106311845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106311845
04131 Membrane trafficking [BR:
boe04131
]
106311845
03029 Mitochondrial biogenesis [BR:
boe03029
]
106311845
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
boe04812
]
106311845
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
106311845
mRNA cycle factors
P-body specific factors
106311845
Membrane trafficking [BR:
boe04131
]
Others
Actin-binding proteins
Myosins
106311845
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106311845
Cytoskeleton proteins [BR:
boe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
106311845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
DUF4201
TPR_MLP1_2
Snapin_Pallidin
nSTAND3
AAA_16
DUF1664
AAA_22
Yuri_gagarin
Motif
Other DBs
NCBI-GeneID:
106311845
NCBI-ProteinID:
XP_013604611
LinkDB
All DBs
Position
C8:complement(36771591..36780995)
Genome browser
AA seq
1513 aa
AA seq
DB search
MQAAPVIIVGSHVWVEDPHLAWIDGQVTRIDGQNIHVRTNKGKTVVTSVYFPKDTEASPG
GVDDMTKLSYLHEPGVLQNLETRYELNHIYTYTGNILIAVNPFQRLPHLYATDMMEQYKG
IGLGELSPHVFAIGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRSGV
EGRTVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLERS
RVCQISDPERNYHCFYLLCAAPPEDIKKYKLGNPQSFHYLNQSSCYELDGVDDASEYLET
RRAMDVVGISNEEQEAIFRVVAAILHLGNIDFGLGEEIDSSVIKDENSRFHLNLAAELLM
CNAKSLEDALIRRVMVTPEEIITKTLDPDNAIASRDTLAKTIYSHLFDWIVNKINTSIGQ
DPRSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWS
YIEFIDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFSNKLFQTFKGHERFSKPKLSQ
TDFTISHYAGEVTYQSNHFIDKNKDYIVAEHQALFTASNCSFVAGLFHALHEDSSRSSKF
SSIGSRFKQQLHSLMETLNGTEPHYIRCIKPNNILKPGIFENFNVIHQLRCGGVLEAIRI
SCAGYPTRLAFYDFLERFGLLAPEVLDGNYDDEVACQMILDKKGLRDYQVGKTKIFLRAG
QMAELDARRAEVLGNAARVIQRQFRTWIARKKFRSIRNAAIVLQSFLRGEIARTVHKKLI
IEAAALRFQKNFRRYIARKSFVTNRSAAVVLQTGFKGMIARNEFRLRRQTKAAIVIQAHW
RGQRAYAYYIRLKKAAIVTQCAWRCRLARRELRMLKLAARETGALKDAKDKLEKRVEELT
WRLQLEKRLRTDLEEAKVQEVAKLQEALHTMRSQLKEATVMVLKEQEAARIAIEEAGSVK
KEPVVVEDTEKINSLSNEIEKLKGMLSSETHKADEATQAYRSALVQNEELSKRLDEAGKK
INQLQDSVQRFQEKVSNLESENKVLRQQSLALSPASRALALRPKTTIIQMQRTPERFTFS
NGETKQIQEPETEDRPQKSLNQKQLENQELLLKSISEDIGFSEGKPVAACLIYKCLIHWR
SFEVERTNIFNRIIETIASAIEMQENDDVLCYWLSNSATLLMLLERTLKAGNIPPSRHRA
MSTSLFGRVSQSFIGSPQSVGFPFMNGRAIGGGLDELRQVEAKYPALLFKQQLTAYLEKI
YGVIRDRMKREIAPLLAVCIQAPRQPRSGLIKGRSHNNFEAQKALSAHWQSIVTCLNGHL
RTMRANYVPSLLISKVFGQIFSFINVQLFNSLVLRRECCSFSNGEYVKTGLAELEKWCHD
ATEEFAGSAWDELKHIRQAVGFLVIHQKPKKSLHEITTELCPVLTVQQLYRISTMYSDDK
YGTHSVSSEVMGSMRQTVSEDTNKSFLLDDDSSIPFSLEDISKSMPNVEVAEIDPPPLIR
QNTSFMFLLERSD
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgctccggttataattgtgggctcgcatgtgtgggttgaagatccgcattta
gcatggatagatggacaagttactcgcatcgatggtcaaaacattcatgtcagaactaac
aaaggcaaaaccgttgtgacgagtgtatatttccccaaggatactgaagcttcacctggt
ggtgtagatgacatgacaaagctttcatatttgcatgagcccggagtcttacaaaacctt
gagacgagatatgaacttaaccacatctacacatatacagggaatatcttaattgcagtt
aatccattccaaaggctgcctcatctttatgcaaccgatatgatggaacaatataaagga
attggacttggagaactgagtcctcatgttttcgcaatcggggatgctgcatacagggcg
atgattaatgaagggaaaagtaattcgattttggtaagtggagaaagtggtgctggtaaa
acggagacgacaaagatgctcatgaggtaccttgcctttttgggagggaggtctggtgtt
gaaggaagaacagttgaacaacaagtcttagagtccaatccagttctggaagcatttggc
aatgcaaaaactttacggaacaacaattcgagtcgctttggtaaatttgttgaaatccaa
tttgacaagcatggaaggatatctggggcagctatcaggacttatctgcttgagaggtcc
cgtgtttgccaaatctcagaccctgagagaaactaccattgcttttaccttctttgtgct
gctccaccagaggacataaagaagtacaagttgggaaacccacagtcattccactatcta
aatcagtcaagctgttatgaactggatggtgttgatgatgctagtgaataccttgaaacc
agaagagctatggatgtagttggaatcagtaatgaagaacaggaggcaatcttcagggtg
gttgctgcgattcttcatcttggtaacattgattttggactaggggaagaaattgattcc
tcggtgatcaaggatgaaaattcacgattccatcttaacttggccgcagagctacttatg
tgtaacgccaagagcctagaagatgcacttattaggcgagtgatggttacacctgaagag
attatcacgaaaactcttgatcctgataatgcaattgcgagtagggataccctggcaaag
acaatatattctcacttgtttgactggatcgtgaataaaatcaatacttccatcgggcag
gacccaaggtcaaagtcaattattggagttctggatatctatgggtttgaaagtttcaag
tgcaatagtttcgagcaattctgcatcaatttcacgaatgaaaaactgcagcagcatttt
aatcagcatgtttttaagatggagcaggaggagtacaccaaagaagagatcgattggagc
tacatagaatttattgataaccaagatgttcttgatttaattgaaaaaaaaccaggagga
atcatttcacttctagatgaagcctgcatgtttcccaagtctacacatgaaaccttctcc
aataagttgttccagacgttcaaaggtcacgagagattttccaaaccgaagctctctcag
actgattttacgatatcgcattatgcaggagaggttacttatcaatcgaaccattttatc
gacaagaacaaggattatatagttgctgaacatcaggcgctgtttactgcatctaattgc
tcctttgtggctggtttgttccatgcgcttcatgaagactcatccaggtcatcgaaattt
tcttccattgggtcacggttcaagcaacaacttcactcgctgatggaaaccctgaatggt
acagaacctcattacataagatgtataaagccgaataatattcttaaacctggcatcttt
gagaatttcaacgtcattcatcaattacgttgtgggggtgttcttgaggccattaggatc
agttgcgctggctatcctaccagacttgccttctatgattttctcgaacgttttggtctt
cttgctccagaagttttggacggaaattatgatgatgaagtagcttgccaaatgattctt
gataagaaaggtctgagggactaccaggttggaaagacaaagattttccttcgagctggt
cagatggctgaactagatgctcggagagcagaggtgcttggaaatgctgccagagtcatt
cagaggcaattccgcacatggattgcccgaaagaaattccgttctattcgaaatgctgca
attgtattgcaatccttcctaagaggcgagattgcccggacagtacacaaaaaactgatt
atagaagctgcagctctaagattccagaagaatttccgccggtacatcgccaggaaatct
tttgtaaccaacagatcagctgcagtcgtgttgcagactggctttaagggcatgattgca
cgtaatgaattcaggttaagaaggcaaacaaaagctgccatagtgattcaggcccactgg
cgtggtcagcgagcatacgcatattacataagacttaagaaggcggcaatagtcactcaa
tgtgcctggagatgcagacttgctaggagagagcttagaatgctaaaattggctgcaaga
gaaactggtgctcttaaagatgctaaagataaattggagaagcgggtggaagagcttacc
tggcgtttgcaattggagaagcgattaaggactgatttggaggaggcaaaggtgcaagaa
gttgcaaagctgcaagaggctttgcacaccatgcggtcacagttgaaagaagctactgta
atggtattaaaggaacaggaggccgctcgaatagcaattgaagaagcaggttcagtaaaa
aaggaacctgttgttgttgaagatacagagaagataaattctttgagtaacgaaattgag
aagctaaagggaatgttgtcatcagaaacacataaggcagatgaagcaacgcaggcttat
cgcagtgcattagtccaaaatgaggaattaagtaagagacttgacgaagctggaaaaaaa
ataaaccagcttcaagattctgttcagagattccaagaaaaagtctctaatttggagtca
gagaataaggtactccggcaacagtctcttgctctctcaccagctagtagagctttggcc
ctaagaccaaaaactaccataattcagatgcagagaactcccgagagatttactttctcc
aatggagaaacaaaacaaattcaggaacctgaaactgaggataggccccagaaatcgctt
aatcagaaacagctggaaaaccaggagctactactaaagtctatctcggaagatatagga
ttttctgaaggcaagcctgttgctgcatgcctgatatataagtgtctgatacactggaga
tcttttgaagtagaaaggaccaatatatttaatcgtataattgagacaatagcatccgcc
atcgagatgcaggaaaacgacgatgtactatgctattggttatccaattccgccacactt
ttaatgttacttgaacgcactctgaaagcgggtaacatacctccctcgagacatcgggcg
atgtctacatctttgtttggacgagtatctcagagtttcataggctctccacaaagtgtt
ggattcccatttatgaatggaagggcgattggtggagggctagacgaactacgtcaagtg
gaagctaaatatcctgctttgcttttcaagcagcagctcaccgcttacctagaaaagatt
tatggagtgatccgagaccgtatgaagagagagattgcgcctctgcttgctgtttgcatt
caggcaccaaggcaaccacgttctggtttaataaaaggacgctcacataataattttgag
gctcaaaaagcgctaagtgctcattggcaaagcattgtcacatgtctaaacggccacttg
aggactatgagggccaactatgtgccttcgttgctaatttctaaagtgttcgggcagata
ttttcatttatcaatgttcagttgtttaacagccttgttttgcgacgtgaatgctgctcg
tttagcaacggagagtatgtaaaaacaggacttgcagagcttgaaaagtggtgccatgat
gcaactgaggagtttgctggttcggcttgggatgaactaaagcacatcagacaagctgtt
ggcttcttggttatacatcagaagcctaagaaaagcttacacgagataactactgaactt
tgtccggtgcttaccgtgcagcaactttacaggatcagtactatgtattctgacgacaaa
tacggaacacatagcgtatcttcagaggtgatgggaagcatgaggcagacggtttcagag
gataccaacaagtcatttttactagacgacgattcgagcatcccattctcgcttgaagac
atctcgaaatcgatgccaaacgtagaggttgcggagatcgatcctcctccattgattcgc
caaaacaccagcttcatgttcttgttggaaaggtcagactga
DBGET
integrated database retrieval system
