Brassica oleracea (wild cabbage): 106311925
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Entry
106311925 CDS
T04124
Name
(RefSeq) valine--tRNA ligase-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106311925
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106311925
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106311925
Enzymes [BR:
boe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
106311925
Amino acid related enzymes [BR:
boe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106311925
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106311925
Prokaryotic type
106311925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
106311925
NCBI-ProteinID:
XP_013604718
UniProt:
A0A0D3DXB9
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Position
C8:37733331..37739090
Genome browser
AA seq
1101 aa
AA seq
DB search
MSLLFLTRAKPLFLSRYLSSFSSPSPTNLLRRSFHGSATMSEAEKKILTEEELERKKKKD
DKAKEKELKKLKALEKAKLAELKAKHAKDGTSAPKKSAKKSSKRDASDENPADFVDPETP
LGDKKRLSSQMAKQYSPAAVEKSWYAWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHI
GHALTSAIEDTIIRWKRMSGYNALWVPGMDHAGIATQVVVEKKLMRERGLTRHDVGREEF
VNEVWKWKNQHGGTILTQLRRLGASLDWSRECFTMDEPRSKAVTEGFVRLYKEGLIYRDI
RLVNWDCVLRTAVSDVEVEHIDIKEKTLLNVPGYDKPVEFGLLTSFAYPLEGGLGEVVVA
TTRVETMLGDTAIAIHPDDARYKHLHGKFAVHPFNGRKIPIICDGILVDPNFGTGCVKIT
PAHDPNDCEVGKRHDLEFINILTDDGKINTNGGSDFTGMPRFAAREAVLEALNKKGLYRG
AQNNEMRLGLCQRTGDVIEPMIKPQWYVNCSVIGKEALDVAINDENKKLEFVPKQYTAEW
RRWLENIRDWCISRQLWWGHRIPAWYAALEEDERKEVGAYNDHWVVARTEEEARKEAADK
FSGKKFELTQDQDVLDTWFSSGLFPLSVLGWPDETEDFKAFYPTSVLETGHDILFFWVAR
MVMMGMKLGGDVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLDALHKRLEEG
NLDPKELVVAKEGQVKDFPNGISECGADALRFALVSYTAQSDKINLDILRVVGYRQWCNK
LWNAVRFAMMRLGDDYSPPLTLSPETMPFSCQWILSVLNKAIAKTVESLNAFEFSDAANT
VYAWWQYQFCDVYIEAIKPYFAGDNPAFASERAHAQHALWVSLETGLRLLHPLMPFVTEE
LWQRLPSTKNTERKASIMICDYPSAIENWTNEKVETEMETVLASVKCLRALRAGLLEKQK
NERLPAFALCENNVTSEIVKSHELEIRTLANLSSLEVLLKGEHAAPPGSAVEAVNENLKV
YLKVNRAINTEAEQEKIRNKIDELQKQKEKLQKVMSASGYEEKVPANIKEDNATKLAKIL
QEFDFFEKESARLVAETGNEQ
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgctcttcctcacgagagccaagccgttatttctatctcgctatctctcctcc
ttctcctctccctcgcctaccaatctactacgtcgctcctttcacggttccgcaacaatg
tctgaagcagagaagaagatcctcactgaagaggagcttgagcggaagaagaagaaagac
gacaaggctaaagaaaaggagttgaagaagctaaaggctttggagaaagcgaagcttgca
gaactaaaggcgaaacatgcgaaagatggaaccagtgcccctaaaaagagcgcaaagaag
agttccaaacgagacgcgtcagatgagaatcctgcggattttgtggaccctgaaactcct
cttggtgataagaaaaggctctcctcacagatggctaagcaatacagtcctgctgccgtt
gagaaatcatggtatgcttggtgggagaaatctgacctttttaaggcggatgctaagagt
tccaagccaccctttgttattgttcttcctcctccaaatgtgactggagccttgcatatt
ggccatgccctaacatctgccattgaggatacgattattcgttggaagagaatgtctggg
tataatgctttgtgggtgcccgggatggaccatgctggtatagctacacaggttgtggtt
gaaaagaagctcatgcgtgaaagaggattgactaggcatgacgttggccgggaagaattc
gtaaatgaagtatggaagtggaagaaccaacatggtggcacgattctgacacagcttcgg
cgtctaggagcttctcttgattggtctcgtgagtgttttacaatggacgaaccaagatca
aaagctgttactgagggctttgtacggttatacaaggaagggcttatctatagggacatt
cggcttgttaattgggattgtgttttaagaacagccgtatctgacgttgaggtggagcat
atcgatattaaagaaaaaacgctactaaatgttcctggctatgataagccagtagaattt
ggtcttcttacgtcatttgcttaccctctggagggaggcttgggagaggttgttgttgcc
actacaagggtggaaacaatgcttggggatactgccattgctattcatcctgatgatgca
agatacaagcatcttcatgggaaatttgctgtgcacccatttaatggacggaaaatacca
atcatctgtgatggaatacttgttgatccaaactttggtactggctgtgttaagattact
cctgcccatgaccccaatgattgtgaggttggaaagcgtcacgatcttgaatttataaac
atattaactgatgatggaaaaatcaacacaaatggcgggtctgacttcacagggatgcca
cgcttcgcagcccgtgaggcagttcttgaagctctgaacaagaaggggctttacagaggg
gcccaaaacaatgaaatgaggcttggactttgccaaagaaccggtgacgttattgagcct
atgattaaacctcaatggtacgtcaattgcagcgtgattggaaaggaggctctcgatgtt
gctatcaatgatgagaacaagaagctcgagtttgtaccaaagcagtacactgcagaatgg
agaagatggctagagaacatacgtgactggtgtatttcaagacagctttggtggggccac
cggattccagcatggtacgccgctctagaggaagatgagcgcaaggaggttggtgcgtac
aacgaccattgggttgttgctagaaccgaggaagaagctcgtaaagaggctgctgataaa
ttttctgggaaaaagtttgaactgacgcaagatcaggatgtacttgatacgtggttttct
tctgggctctttccattatctgttctgggatggcccgatgaaactgaagacttcaaagct
ttctatccaacatctgtcctagaaactggacacgatattctctttttttgggttgctcgt
atggttatgatgggaatgaaactaggtggtgatgttccattcagtaaggtttatttccat
cctatgatacgtgatgcacatgggcgtaagatgtcaaaatctcttggaaatgtcattgat
ccgcttgaagtaataaacggggtaactcttgatgctcttcataagagattagaagagggc
aacttggatccaaaagagctggttgttgccaaagaaggacaagtgaaggactttccgaat
ggtatttctgaatgtggtgctgacgctcttcgctttgcactcgtctcttacactgctcag
tctgacaaaataaacttggacatcctccgagtggttggttaccgccaatggtgtaataag
ctgtggaacgctgttagatttgcgatgatgaggcttggcgatgattattcgcctccactg
actctaagccctgaaacgatgccattcagctgccagtggattctctctgtgctaaacaag
gcaatagcaaagacagtggagtcactgaatgcatttgagttctcggatgcagccaacaca
gtatacgcatggtggcaatatcagttctgcgatgtgtacatcgaagcaatcaagccttat
tttgctggtgacaaccctgcgtttgcttcagagagggctcatgcacaacatgctctctgg
gtatctctggagactggtttgagactgcttcaccctcttatgccctttgttactgaagag
ctatggcaacggctgccttcaaccaaaaacactgaaaggaaggcttctattatgatatgt
gactacccatctgcaatagagaattggacaaatgaaaaagtggagaccgaaatggaaacc
gttctagcgagcgtgaagtgcctgagggcacttcgggctgggttgctggagaaacagaag
aatgaaaggttacctgcttttgctctgtgtgaaaacaacgtaacatctgagattgttaaa
tctcacgagttggagatcagaacccttgcaaatctatcgtccttagaggttctgttaaag
ggagaacacgcagccccacctggatctgcagttgaggccgtgaacgagaacctcaaggta
tatctcaaagttaacagagccattaacacagaagctgagcaagaaaagatcagaaacaag
attgacgaactacaaaaacaaaaggagaagttgcagaaggtgatgagcgcgtctgggtac
gaagagaaggtcccagcaaacataaaagaagacaacgcgacaaagcttgctaagattctc
caagaattcgatttctttgagaaggaaagtgctcgtctcgttgcagagacaggaaatgag
caatag
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integrated database retrieval system
