Brassica oleracea (wild cabbage): 106311955
Help
Entry
106311955 CDS
T04124
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1 isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106311955
Spliceosome [BR:
boe03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106311955
Other components
Complex C specific factors
106311955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
106311955
NCBI-ProteinID:
XP_013604761
LinkDB
All DBs
Position
C8:complement(36965554..36968413)
Genome browser
AA seq
856 aa
AA seq
DB search
MDEYQEMERFGMENDYEGGRWENGEFVYEKRKEKRKQTKHDATYGVFAESDSDSDDSSGG
GGRRKKNRRDLDSGRKADLTKPVNFVSTGTVMPNQEIDREPNDEEDDMVVDDDSEVRGGL
GAGRSGLGLGLGLGGNASGFDDEDSLLPGAFGKKIAEGAKMREKAKMEKRGQEGGAKGGK
KESLGGGDIGKFEKATKGIGMKLLEKMGYKGGGLGKNQQGIVAPIEAQLRPKNMGMGYND
FKEAKLPDLKKVEEKKSVTASGNDQGHGDRGGRNLWKMKKARKEVYVTAEELLEKKQEEG
FGGGQTIIDMRGPQVRVVTNLENLDAEEKAREADVPMPELQHNLRLIVDLVEHEIQKIDR
DLRNERESALSLQQEKEMLIKEEEKQKTHLDNMEYIADEISRIELENTSGSLTLDSLANR
FEDLQASYPHDYMLCNLSTIACSLALPLFIRIFQGWDPLRDAGHGLKAISSWRKLLEVEE
NQNIWVISTPYSQLVSEVVLPAVRIAGINTWEPRDPEPMLRFIETWEDLLPSSVMDTILD
TVVLPKLSTAVEYWDPRREVVAIHVWVHPWLPRLGQKLEFLYQIIQMKLSNVLDAWHPSD
PSAYTILSPWKTVFDATSWEQLMRRYIVPKLQLALQEFQVNPANQNLDQFNWVMKWASAV
PIHLMADLMERFFFPKWLDVLYHWLRAKPRFDEIHNWYYGWKKSFPQELSANERIRIQLK
RGLDMLMEAVEGVEVSQPRAKAQEQRHFEPARAQAKVQMDSNEVLSLKEVLEVFAQEKEL
LFKPKPNRMHNGLQIYGFGNVSVVIDSVNQKLLAQKDGGWYLVTPDDLLRMHNNASVSGK
QGVHKKYEDNEYSTQC
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtatcaagagatggagaggttcggcatggagaacgactacgaaggaggccgc
tgggagaacggcgagttcgtatacgaaaagaggaaggagaagcggaaacaaaccaagcac
gacgctacttacggagtcttcgccgagagcgattcggattccgacgattccagcggcgga
ggaggtcggaggaagaagaaccgcagggatctggattcgggaaggaaggccgacttaacc
aagcctgtcaatttcgtatctacaggtactgttatgccgaatcaagagattgatagggaa
cctaatgatgaggaggatgatatggttgttgatgatgatagtgaagttagaggtggattg
ggtgctggaaggtcaggtttagggttagggttagggttagggggtaatgcgtctggtttt
gatgatgaggatagtcttttacctggtgctttcgggaagaagatagctgagggggcaaag
atgagagagaaggctaagatggagaagagaggtcaagagggtggtgcaaagggagggaag
aaggagagtttaggtggtggtgatataggtaagtttgagaaggctactaaaggaattgga
atgaagcttctggagaagatggggtacaagggaggtggtcttgggaagaaccagcaaggt
attgtagctcctattgaagcacagttgaggcccaagaatatgggtatggggtataatgat
ttcaaggaggcaaagttgcctgatttgaagaaggtggaggagaagaagtctgttacggcc
agtgggaatgatcagggccatggtgatagaggagggagaaacctttggaagatgaagaag
gcgaggaaggaagtttatgtcactgcagaggagttgttggagaagaagcaggaagagggt
tttggtggtgggcagaccattattgatatgcgaggaccacaggttcgggttgtgacgaat
ttggaaaatttagatgcagaggagaaagcaagagaagcagatgttcctatgcccgagtta
cagcacaacttgcgactgattgttgatttagtcgaacatgaaattcaaaagattgatagg
gacttgaggaacgagagagaatcagccttgagcttgcagcaggagaaggagatgcttata
aaggaggaagagaaacaaaaaacgcacttagacaacatggaatatatcgcagatgagata
agtcgaatcgaactggagaatacgtctggtagcttgacgctggattcccttgcaaatcgt
ttcgaggacctacaagcaagctatcctcatgattacatgctttgcaacttgtccaccatc
gcttgctcactggccttgcctctctttatcagaatatttcagggctgggaccctcttagg
gatgcagggcatggtttgaaggctatatcttcttggagaaagcttttggaagtcgaggaa
aatcaaaatatctgggtaatctcaacgccttacagtcaactagtctcggaggtagtgtta
cctgctgtgcgtatagctggcatcaatacctgggaaccgagagaccctgagccgatgctt
agattcatagagacatgggaagatctgctgccttcatctgtcatggatacgattttggac
acagtagtgctgccaaaactgtcaactgccgttgaatattgggacccacgaagggaagtt
gttgcgatccatgtttgggtgcacccttggttgccaagacttggtcagaagttggagttt
ctatatcagatcattcagatgaagttgagtaatgttcttgatgcttggcatcctagtgat
ccatccgcctacactattctctctccatggaagacggtttttgatgctacaagctgggaa
cagcttatgcgacgttacatagtccccaaacttcagctggccttgcaggagtttcaggta
aacccagcaaaccagaatttagaccagttcaactgggttatgaagtgggcatctgcagtg
ccgatacacctaatggctgatctgatggagaggttcttcttcccgaaatggctggatgtg
ttgtaccactggttgcgtgctaaaccgaggttcgacgagatccacaactggtattacggc
tggaagaagtcattcccgcaagagctttcagcaaacgagaggatccgaattcagttgaag
cgtggtttagatatgttgatggaagctgttgaaggagttgaagtgtctcagccaagggcg
aaggcacaagagcagagacacttcgagccggctcgggctcaggccaaagttcagatggat
agcaacgaggtgctgagtttgaaagaagtgttggaagtgtttgcgcaagagaaggagttg
ctgttcaaacctaagccgaatagaatgcacaatggtctccagatttatgggtttgggaat
gtgagtgtggtgatagactcggttaaccagaagctgttggctcagaaagatggaggctgg
tatcttgtaactcctgatgacttattgaggatgcacaacaatgcaagtgtctctggaaaa
caaggagttcataagaagtacgaagataatgaatacagcacgcaatgttaa
DBGET
integrated database retrieval system
