Brassica oleracea (wild cabbage): 106312116
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Entry
106312116 CDS
T04124
Name
(RefSeq) probable H/ACA ribonucleoprotein complex subunit 1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106312116
Spliceosome [BR:
boe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106312116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
GEMI5_RBS
Radical_SAM_N
Motif
Other DBs
NCBI-GeneID:
106312116
NCBI-ProteinID:
XP_013604959
UniProt:
A0A0D3DMI0
LinkDB
All DBs
Position
C8:15901159..15903476
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AA seq
367 aa
AA seq
DB search
MATLNPFDLLDDDAEDPSQLAAAKPLKVEKAAPAQPAKLPSKPLPPSQAVREGKNGPGGG
SGGRARSGGFNRNNDAPANENGYGGGYRRSEEGDGGRRGGSVGGYRGRSGRRGGYNNGES
GDFERPRRNYDRQSGAAHGNEFKRDGAGRGNWGTTEDEIPPVTEESATVVEKDLAVEKEG
EATDANKETPVEAQAEKEPEDTEMTLEEYEKVLEEKRKALQATKVEERKVDTKVFEAMQQ
LSSKKSNNDEVFIKLGTEKDKRPVEREEKTKKSLSINEFLKPANGESYRGGYRGGRASRG
PREGADRGGRGPREGADRGGRGPRGDDRGGRGPRRDNGGGEQKAAAPKFVAPAPKIEDAA
QFPTLGK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttgaaccctttcgatctgttggacgatgacgcagaggatcctagccagctc
gctgcggctaagccattgaaggtagagaaagcggctccagctcagcctgctaagttgcct
tctaagccgcttcctccttctcaagccgtgagggagggaaagaacggtcctggtggaggt
agcggtggccgtgctaggagtggtggattcaacaggaacaatgatgctcctgctaatgag
aacggatatggtggaggctacagacgctctgaagaaggagatggaggtagacgcggtggg
tctgttggtggataccgtggtcgtagtggtcgccgtggaggatacaacaatggagagtct
ggcgactttgaacgcccacgtaggaactatgaccgccagagtggagcagctcacgggaat
gagtttaaacgtgatggagctggccgtggcaactggggaaccactgaggatgagattcct
ccggtgactgaagaatccgcaacagtggtggagaaggatttggctgttgagaaggaaggt
gaagcaactgatgctaacaaagagacacctgttgaagctcaagcagagaaagagccagag
gacacggagatgactctggaggagtatgagaaagtcttggaggaaaagaggaaagctctg
caggccaccaaggttgaagagaggaaggttgacaccaaagtgtttgaggccatgcaacag
ctctcaagcaaaaagagcaacaacgatgaggttttcatcaaactgggaacagagaaggac
aagcgcccagttgagagagaagagaagaccaagaagtcgttgagcatcaatgagtttttg
aaacctgccaatggcgagagttacagaggtggttaccgtggcggaagagcaagccgtgga
ccaagagagggagctgacagaggaggtcgtggaccgagagagggagccgacagaggaggt
cgtggaccaagaggagacgacagaggtggtcggggaccaagaagagacaacggaggagga
gagcagaaggctgctgcaccaaaatttgtggctcctgcaccaaagattgaagacgcagca
cagttccctactctgggcaagtaa
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