Brassica oleracea (wild cabbage): 106312147
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Entry
106312147 CDS
T04124
Name
(RefSeq) tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4
KO
K15443
tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106312147
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106312147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WDR55
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
CPSF_A
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
106312147
NCBI-ProteinID:
XP_013605003
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All DBs
Position
C8:146220..148567
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AA seq
424 aa
AA seq
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MEESHIEEEGERQTKHEVAPALISVHPFQKSVAVTVGSALRVFDLIEGRPVSLVDESDEP
SHKDSIRAIRYGSSGKIFASAGDDKLVKIWSADSWQCLNTISSEKRVTAVAISSDDSYVC
YADKFGVVWVVNLDGINEGKVLPSKKGVQLLCHYCSIITSLEFSPDGRYILSADRDFKIR
VTVFPKKPLQGAHEIQSFCLGHTEFVTCITFVQNSELTQGYLMSGSGDSSVRLWDITSGS
LLDTCDVSPTVKHLESNESEPTQVTVTDMCALPNSSLAAVSIQSFQGIVLLHCDLSAHTL
SITKVIKIPGDSFIPTSISFSTSTRLLWMVSGASNGSNHPGYTRVRLISRIEAEPSSVLE
DEQVPGGTTLLEHLQGKVSIEESVMSAAAEAVRAAMCSLMVKKQYSEENREFRKNNRNDK
KPTQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatctcatatagaagaagaaggagaaaggcagaccaaacacgaggtcgctcct
gcattgatatccgttcatccatttcagaagtctgtcgctgtcactgtcgggtcggctctt
cgtgtattcgatcttatagagggccgtccagttagtttggtggatgaatctgatgaacct
tctcacaaggattccattagagctattcgatatggttcaagtgggaagatttttgcatct
gcaggcgatgacaagctcgttaagatttggtctgctgattcttggcagtgtcttaacacc
atatcttctgaaaagagagttaccgcggttgccataagcagcgacgattcatatgtttgc
tatgcggacaagtttggtgttgtgtgggtggtaaacctggatgggatcaatgagggtaaa
gttttacctagcaaaaagggtgtgcagctgctttgccattattgtagcattattacaagc
ttggagttttccccagatggtcgatatattcttagtgcagatcgagactttaagatcagg
gtgactgtttttcctaagaagcctctacaaggggctcatgaaatacagagcttttgtctt
ggacatacagagttcgtcacctgcataacctttgttcagaattcagagcttactcaagga
tacctcatgtctggaagtggagattccagtgttcgactgtgggatattacatctgggtct
cttctggacacatgtgacgttagtccaacggtaaaacatttagagtctaatgaaagtgag
ccaacgcaagtcacagttaccgatatgtgcgcactcccaaattcttctcttgcagcagtg
tctattcaaagttttcaaggaatagtattgctacactgtgatttatcagcccatactctc
tccattacaaaggtgattaaaatccctggagatagtttcatccccacaagtatctccttt
agcacatcaacaaggttactatggatggtatcaggagcctcgaatggttcaaaccatcct
ggttatacaagggttcgtctcatctcgcgcattgaagctgaaccatcttcagtccttgaa
gacgagcaggttcctggagggacaacactgttggagcatttgcaaggtaaagtttcgata
gaagagagtgtgatgagtgctgcagcagaagctgtgagggcagcaatgtgcagccttatg
gtgaagaagcaatactctgaagagaatagagagttcaggaaaaacaacagaaatgataag
aaacccacacagtga
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