Brassica oleracea (wild cabbage): 106312369
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Entry
106312369 CDS
T04124
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106312369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106312369
03036 Chromosome and associated proteins [BR:
boe03036
]
106312369
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106312369
Coactivators
SAGA/TFTC/STAGA complex
106312369
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106312369
STAGA complex
106312369
TFTC complex
106312369
SAGA complex
106312369
SLIK complex
106312369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
106312369
NCBI-ProteinID:
XP_013605322
LinkDB
All DBs
Position
C8:complement(851095..855041)
Genome browser
AA seq
545 aa
AA seq
DB search
MGIVPKETIEVTAQSIGITNLSPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD
VDGALNLRNLEPSYGFASGGPFRFRKAIGHQDLFYTDDREVDFKDVIEAPLPKAPLNTEV
VCHWLAIEGVQPAIPENAPLEVIRAPAENKIYEQKDVPLIDVRLPVKHVLSRELQLYFQK
IAELTMSKSSPALFKKALVSLASDSGLHPLVPYFTNFIADEVSRGLNDFLLLFNLMHVVR
SLLQNPHIHIEPYLHQLMPSIVTCLVSRKLGNRFADNHWELRDFTANLVGLICKRFGNAY
ITLQSRLTKTLVNALLDPKKALTQHYGAIQGLSALGHNVVRVLILSNLEPYLTLLEPELD
AEKQKNQMKSYEAWRVYGALLRAAGLCIHDRLKIFPNLPSPSPSFLHKGKGKIISAEPRK
RKLSADSSENQSPHKRLMITTDGLRPEDHTGPAPMHVDKPMGNYNPPQNSVQPSSSEQAS
DGNESESRNGKEKERGKGRSITMKAILGQIWKDDLDSGRLLVKLHQLYGDRILPFSPSTE
MSVFL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggcattgtaccgaaggaaacgattgaggttacagcacagagtattgggattaccaat
ttgtcacctgaggctgcgcttatgcttgctcctgatgttgagtatcgtgttcgtgagatc
atgcaggaggctatcaaatgcatgcgtcactcaaagagaacgactttaacagcttcggat
gtagatggtgctctcaacttaaggaaccttgagccgtcatatggctttgcctcaggagga
ccgtttcgatttagaaaggctattgggcatcaggatttgttctatactgatgacagagag
gtggatttcaaagatgtgattgaagccccactaccaaaagctccccttaatactgaagtt
gtctgccactggctggctattgaaggagtgcagccagctatcccagaaaatgctccttta
gaagtcatcagagcacctgcggaaaacaaaatatatgagcaaaaggatgtacctctaatt
gacgttaggctaccagtgaagcatgtactatctagggaacttcagttatacttccaaaag
attgctgaacttacaatgagcaagtcaagtcctgctctgtttaaaaaagcattagtgagc
ttggcttcagactcaggacttcatcctctagttccatattttacaaatttcattgctgat
gaggtatcacgtggtttaaatgacttcctactcctgtttaatctaatgcacgttgttaga
agtcttctacaaaacccacatatacacatagaaccatatctgcaccagttgatgccatct
attgtaacatgccttgtatcgagaaagcttggaaatagatttgccgataaccattgggag
cttcgagattttacagcgaatctggttggactgatatgtaaaaggtttggaaacgcatac
attacccttcagtctcgtcttacgaaaactttagtaaatgcacttttggacccaaagaaa
gctttgactcagcactatggtgcaattcaaggattatcagcattggggcataatgttgta
cgcgttcttattctgtcaaatctcgaaccgtatctgactcttctcgaaccagaactggat
gctgagaagcaaaagaaccaaatgaaaagctacgaagcttggcgtgtgtacggggccttg
ctgcgtgctgcaggcttgtgtatacatgatcggcttaaaatcttcccaaatttaccatcc
ccttcaccaagtttcctccataagggaaagggaaaaataatcagtgccgagccacgtaaa
cggaagctgagtgctgattcttcagaaaaccagtcaccccataaaagactgatgataact
acagatgggttacgaccggaagatcacaccggtccagctccaatgcatgtagataaaccg
atgggaaattacaatccgccacaaaactctgttcaaccatcctcatcagaacaagcttct
gatggtaatgaatctgaaagcagaaacggaaaggagaaggaaaggggcaaaggccggtcc
attaccatgaaagcaatccttggtcagatttggaaagatgaccttgattctggacggctc
ttggtgaaactgcaccaactatatggtgataggattcttccttttagcccttctacagag
atgtcagtattcctctaa
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