Brassica oleracea (wild cabbage): 106312392
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Entry
106312392 CDS
T04124
Name
(RefSeq) paired amphipathic helix protein Sin3-like 5 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106312392
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
106312392
REST complex
106312392
Heterochromatin formation proteins
Other heterochromatin formation proteins
106312392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
PAH_ZNF598
HHD_RTEL1
YIF1
Motif
Other DBs
NCBI-GeneID:
106312392
NCBI-ProteinID:
XP_013605359
UniProt:
A0A0D3AA75
LinkDB
All DBs
Position
C1:26844458..26850466
Genome browser
AA seq
1115 aa
AA seq
DB search
MKRVREEVYVEAQTRGQTNGRALTIGGGGGNMGGLTTNDALSYLKAVKDMFQDKKDKYDT
FLALMKDFKAQRVNTDGVIASVKELFKGYDDLLLGFNTFLPKGYRITLPEKKPVAFGEAI
DFVNKIKARFGDDNRAYKRFLDILNMYRKEGKSISSVYQEVTLLFQGHEDLLAEFVNFLP
NNSGSGSGSSAVPHDRSSSLHPMHFNKKIKIGSRLDEYTAHSDQREDGDENLVAAGNSRG
KSLNQGQWPPGEDNEDVVFGQKNNMVKGINELDLTDCVQCTPSYRHLPDDYPIPISSYRN
SLGEKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNAAIKRVE
TLLEKINNNTISTPICIKEHLSVLNLRCIERLYGDYGLDVMEILKKNSHIALPVILTRLK
QKQEEWARCRFDFRKVWADVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISDGK
HKEDPLHAISVGTKPSFTPDLEFSYSDTQVHADLYQLIKYYCEEICATEQSDKVMKLWVA
FLEPMFGVPSRSQTSEAMIDVAKSKDNQEQHDACEAVKDSTCNVSLVSNLKLITPPTTPN
KENPTVQGSSVAQETIQQDKLHVGAAMNIKDTQPVAPPRKDLLMEGVENRTDVIMGDQKV
EREEGELSPTESFEQDNYEVYRDNGVECLQKLPDNVGNNKEQEHKGGAVCTEAKAKSNTL
PKDDENKITHASGSKCGGQVSSDEEHKGAMNCDRLCSVIESENEAVGMINANESEDGSLT
FSERYLQPVKPLAKHVPGALQVSESNSPNDSRVFYGNDSFYVLFRLHQMLYERIQSAKIH
SERKWKAPDPDNTSPDSYTRFMDALYNLLDGSSDNTKFEDECRALIGAQSYVLFTLDKLV
QKFVKHLHSVAADDTDTKLLQLYTYENYRKPGRFFDIVYHENARALLHEQNIYRIEYSSA
QTRLAIQLMNNGNDHQPEVTAVTVEPGFANYLQNDFLSLVPDEERPGLFLKRNMAKMSGP
DESSGMLRAMEGLKIINEVECKMACSSSKVKYEPNTSDLLYRSKQRKPKVNPDGLDNDKN
PGSSETSRKRRISRFHMCLNRRLAALPLQRGFKHV
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagttagagaagaggtttacgttgaagctcagacacgaggacaaacaaatggt
agggctttaacgataggtggaggaggaggaaacatgggagggctaacaacgaatgatgcc
ctgagctatctcaaagctgtcaaggatatgtttcaagacaagaaagacaagtacgacact
ttccttgcactcatgaaggactttaaagcccagagagttaacactgatggcgtcattgca
agcgtaaaagagttgttcaagggctatgacgacttgcttttgggttttaataccttcttg
cctaagggttacagaataacccttcctgagaagaagcctgtggcttttggagaagctatc
gattttgttaacaagatcaaggcgcggtttggggatgataaccgtgcgtataaaagattc
ctggacatcttgaacatgtatagaaaggaaggcaagtccatctcctctgtctatcaagag
gttactctgttgttccagggccatgaagatctgcttgctgagtttgttaatttcttacct
aataattcaggatcaggttcgggaagcagtgcagtaccgcatgatagaagttcttcactt
catccaatgcattttaacaagaaaataaaaattggaagtaggcttgatgagtataccgct
cactctgatcaacgagaagatggtgatgagaatcttgtggctgctggtaattctcgggga
aaatcccttaatcaaggtcaatggccgccgggagaagacaacgaggatgtagtctttggc
cagaaaaataatatggtcaagggtataaatgaactggatcttactgactgtgtacaatgt
acaccaagctatcgtcacctgccagatgattatcccattcctatttcaagctacagaaat
tcactaggtgaaaaggtactcaatgatcattgggtttctgtcacatcggggagtgaggat
tactcattcaaacacatgcgtaaaaaccagtatgaagaaagcttgtttcggtgtgaagat
gacaggtttgagttggatatgttattagagtctgtgaatgcagcaattaagcgtgtggaa
actcttctggagaagatcaacaacaacacaatctctacaccaatttgtatcaaagaacac
ttatcagtgctgaacctaagatgcattgagcggttgtacggggattatgggcttgacgtt
atggaaattctgaagaagaattctcatatcgccttgccagtgatactaactcgcttgaag
cagaaacaagaagaatgggctaggtgtcgctttgatttcaggaaagtatgggctgatgta
tatgctaagaatcatcacaaatcactagatcaccgtagcttttattttaagcagcaggac
tccaagaatctgagcacaaaaggtttagtggcagaaataaaagatatcagtgatggaaag
cataaagaagacccgcttcatgccatttctgtcggaactaagccctctttcaccccagac
ttggagttcagttattccgatactcaagttcatgctgacttataccaactaatcaagtat
tactgcgaagaaatatgtgctactgaacagtcagataaagtaatgaagctgtgggtagcc
tttttagagcccatgtttggcgttccttctaggtctcaaactagtgaggcaatgatcgat
gtggccaagtctaaagacaaccaagagcagcatgatgcatgtgaggcagtgaaggacagc
acctgtaacgtttctcttgtctcaaacctaaaacttataacacctccaacaacacctaac
aaagaaaacccaacagtacaagggagctctgtcgcacaagaaaccattcagcaagataaa
ctgcatgttggcgcagctatgaatattaaggatacccagccggtggcaccacccagaaag
gatttgttaatggagggtgtagagaatcgtactgatgtaataatgggagatcagaaggtc
gagcgagaagagggtgagttatcccccaccgaaagttttgagcaagacaattatgaggtt
tatagagacaatggcgttgagtgtcttcagaaactgccagacaatgtaggaaataataaa
gagcaagagcacaaaggaggtgcagtctgtactgaagccaaagcaaagagcaatactctc
cctaaagatgatgaaaataaaatcactcacgcctcaggaagcaaatgtggtggccaagtt
tcttccgatgaagagcataaaggagctatgaactgtgaccggctttgcagtgtgattgag
agtgaaaacgaggctgtagggatgattaatgccaatgagagtgaagatggatctctcaca
ttttcagaacggtatctgcaacctgtaaagccccttgcaaagcatgtgcctggagcacta
caagtcagtgaaagtaactctccgaatgattctcgagttttctatgggaatgattccttt
tatgtgctttttaggctgcatcaaatgttgtacgagagaatacaatctgcaaagatacat
tcagagaggaaatggaaagctccagatccagataacacatctcctgattcttataccagg
ttcatggatgctctctacaatttacttgacggctcgagtgataatacaaagtttgaagat
gaatgccgagctcttattggagcacaatcatatgttctcttcacattggacaagctagtt
cagaagtttgtcaagcatcttcattcagttgcagctgatgatacagacaccaagctactg
caactatacacatatgagaactacagaaaaccgggaaggttctttgatatagtgtaccat
gagaatgcgcgagcccttctccatgagcagaacatataccggattgaatattcatctgca
caaacccgtctcgcgattcaacttatgaacaacgggaacgatcatcagcctgaagttaca
gctgtaacggtggaaccaggttttgcaaattatctacagaatgactttctttcgcttgta
cctgatgaagaaagacctggtctatttctgaagaggaacatggcgaaaatgagcggtcca
gatgaatcttcagggatgttgcgtgcaatggaaggactgaagattatcaatgaggtcgag
tgcaagatggcttgcagttcttccaaggtcaagtatgaaccaaacacatcagatcttctg
tatagaagcaagcagaggaaaccaaaagtgaatccagatgggcttgacaatgataaaaat
cctggtagcagtgaaacctcgagaaagcgaagaatatcgcgttttcacatgtgtctgaac
cgtagacttgctgccttgcctttacaacgcggcttcaagcacgtgtga
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