KEGG   Brassica oleracea (wild cabbage): 106312405
Entry
106312405         CDS       T04124                                 
Name
(RefSeq) probable pectate lyase 13
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00040  Pentose and glucuronate interconversions
boe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106312405
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     106312405
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 106312405
NCBI-ProteinID: XP_013605374
UniProt: A0A0D3DT66
LinkDB
Position
C8:29468031..29471602
AA seq 503 aa
MLLPHFSTTISLLCIFFFTLLQATNLTLPHQHPSPDSVALHVVSSINASLSRRQLSSSSS
SCRTGNPIDDCWRCTSSDWSSNRQRLADCSIGFGRGTLGGKNGKIYVVTDSSDNNPSNPS
PGTLRYAVIQEEPLWIVFSSNMLIRLKHELIINSYKTIDGRGSAVHITGNGCLTIQYVQH
VIIHNVHIYDCKPSGGAVVAATPTKSGRRGRSDGDGISIFGAQKIWIDHCSMSHCTDGLI
DAVMGSTAITISNNYFAHHDEVMLLGHDDSYGPDTGMQVTIAFNHFGQGLVQRMPRCRRG
YIHVVNNDFTSWKMYAIGGSGNPTINSQGNRYIAPSDPSAKEVTKRVDSKDDGEWSNWNW
RTEGDLMENGAFFVASGGGVSALYSKASSVEPKASALVDQLTRNAGVFGGPRDDQGQTGD
SYSGYGGGGGGGGSGGGGGGSSGSDGGTSAIGGTTRGSSTSSSDDSNFFGMIFGSNAPPR
PRLTLLFCLIMICVMSISSLLLL
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgctgcttcctcacttctccaccaccatttccctcctctgcatcttcttcttcacactc
ctccaagccactaatctcactctcccccaccagcatccttcccctgactccgtcgctctc
cacgtcgtaagttcaatcaatgcatccctctcacggagacaactctcctcctcctcctcc
agttgccgcaccggcaacccaatcgacgactgctggcgctgcacctcctcggactggtcc
tccaaccgccaacgcctcgccgactgctccatcggcttcggccgcggcacactcggcggc
aaaaacggcaagatctacgtcgtcacagactcctccgacaacaacccatcaaacccatcc
ccaggaactctccgctacgccgtcatccaagaagagcccctctggatcgtcttctcctcc
aacatgctcatccgcctcaaacacgaactcatcatcaacagctacaaaaccatcgacggc
cggggctccgccgtccacatcaccggcaacggctgcctgaccatccagtacgtgcaacac
gtcatcatccacaacgtccacatctacgactgcaaaccctcgggaggcgccgtggtcgcc
gcgacgccgacgaaatccgggaggcggggcagatcggacggcgacgggatctccatcttc
ggagctcagaagatctggatcgaccactgctccatgagccattgcaccgacgggcttatc
gacgcggtgatggggtccacggcgattacgatatcgaataactacttcgcgcatcatgat
gaggtgatgctgttgggtcatgacgatagttatggcccggacacggggatgcaggtgacg
attgcgtttaaccatttcggacaggggcttgttcagaggatgccgaggtgtcggagaggg
tatatacacgtggtgaataatgatttcacgtcgtggaagatgtatgcgattggtggaagt
ggtaatcctacgattaacagtcaggggaatcgttacattgctccttctgatcctagcgcc
aaagaggtgacgaagcgagtggattcgaaggacgatggagagtggtcgaattggaattgg
agaactgaaggagatctgatggagaacggagctttctttgtggcgtctggtgggggagtg
agcgcattgtactctaaagcttcgagtgtggagcctaaagcttcggctcttgtagaccag
ctcactcgaaatgctggcgtttttggtggtcccagggatgatcaaggtcagactggcgat
tcttattctggttatggaggtggtggtggtggtggtggtagtggtggcggcggaggtgga
agcagcggcagcgatggaggaactagtgctattggcggtactacgagaggaagtagcacc
agcagcagcgatgacagcaatttcttcgggatgatcttcggaagcaatgcaccgcctcga
ccacgtttaacattattgttttgtttgataatgatttgtgtaatgtcaatatcaagtcta
ttattgttgtag

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