Brassica oleracea (wild cabbage): 106312417
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Entry
106312417 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: isoamylase 2, chloroplastic-like
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00500
Starch and sucrose metabolism
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
106312417
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
106312417
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Motif
Other DBs
NCBI-GeneID:
106312417
NCBI-ProteinID:
XP_013605389
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Position
C8:196049..199170
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AA seq
856 aa
AA seq
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MAAWSPSAGIRSSCLINNGITETWKFPYASFLTGKNKTKRGSETLIVTRKHIYRDLGSYG
LSKICASKSSVELKEEHVSTRGAKVHDLKKVSSYLFRTKSGALVKVQVEKKIERYSIMVY
VSSLEPSGDDNKSSLVMVWGVFRSDSSCFLPLDFENSDQDSQTPFVKSSLSELMLELEFD
GKESPFYLSFRLKLVSANDPNGLEMLTHRDTNFCVPVGFTAGHPLPLGLSSGPDGGDSWN
FAFFSRNSKSLVLCLYDDSTTDRPALELDLDPYVNRTGDVWHASVDKTWGFVRYGYRCKE
STNSEDDEAESIVLDPYARVIENTISPKFLGSIYKNSSFDWGEDVSPNIPLEKLIVYRLN
IKGFTQHKSSKLPTNVAGTFSGVAEKVNHLKALGTNAVLLEPIFSFSEQQGPYFPFHFFS
PMDMYGQESAVNSLKEMVKRLHSEGIEVLLEVVFTHTAESGALQGIDDSSYYYTGKDSKT
YLNCNYPVVQQLILESLRYWVTEFHVDGFCFINASSLLRGVHGEQLSRPPLVEAISFDPL
LAGTKLIADCWNPRDIKMPKEVKFPHWKRWAELNTRYCRDVRNFVSGRGLLSDLATRVCG
SGDMFTDGRGPAFSFNYISRNSGLSLVDLVSFSGPELVSELSWNCGEEGETNKSAVLXTR
LKQIRNLLFIQYISLGIPVLNMGDKCGVSTKGSPLLESRKPFDWNMLASGFGAQITQFIL
LLTSVRARRSNVFQRNKFLKPESIVWYANDQTTPNWEDTASRFLALGIKTDSGEETTELK
NNDLFIGFNASDRLEKVILPSLPEGRSKWRRLVDTALPFPGFFSVEGETVVTEDELVVYE
MKPYSCTLFETINSTA
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttggtcaccatcagctgggatcagatcttcttgtctaataaacaatggcatc
actgaaacatggaaatttccttatgccagtttcttaactggaaagaacaagactaaacgt
ggatctgagacgctaatagttacaagaaaacatatctacagggatttgggaagttatggg
ttgagtaagatctgtgcttcaaaaagttctgtcgagctgaaggaggaacatgtgtctacg
agaggtgctaaggtccatgacctgaagaaggtatcatcctatctcttcaggaccaagtct
ggtgctcttgttaaagtacaagttgaaaagaagatagagaggtacagtatcatggtttac
gtctcatcgctggaaccaagtggtgatgacaacaagagtagtctggtgatggtttggggt
gtattcaggtctgattcttcctgtttcttgcctctggatttcgaaaactctgatcaagac
tcacaaactccctttgtgaaaagctcattgtctgagttaatgctagagctagaatttgat
gggaaagaatctcctttctacctatcatttcggctcaagttagtgtcagcaaatgatccg
aacggtctggaaatgctcactcacagggacacaaacttctgtgtcccagttggttttact
gctggtcatccactgccattaggcctttcatccggaccagatggtggtgactcgtggaat
ttcgcattcttttcaagaaactctaagagtttggtattgtgcttgtatgatgatagcact
accgatagacctgcgttggagcttgatcttgatccttatgtcaaccgaacaggtgatgtc
tggcatgcttcagttgataaaacatggggttttgtgagatatggctaccgttgcaaggaa
tctactaactctgaagatgatgaagctgagagtattgttttggatccgtatgccagagtc
attgagaataccatctctccgaaatttcttggaagtatatacaaaaactcttcatttgat
tggggggaggatgtgtctccaaacataccactggagaaactcattgtttaccggttgaat
attaagggtttcacacaacataagtcctccaagttgccaaccaatgtagcagggacattt
tctggtgtagctgagaaagtgaaccatttgaaagctcttggaaccaacgctgtcctcttg
gagccaatcttttcattctcggagcaacaaggtccttactttccatttcatttcttttca
ccgatggacatgtatggccaagaatctgcagttaactcgttgaaagagatggtaaagaga
ctgcacagtgaggggattgaggtacttctggaagtagtattcacacatactgctgagtct
ggagctcttcaaggaattgatgacagttcctattattacacgggaaaggattctaaaact
tacttgaactgtaactatcctgtagttcagcagctgatattagagagcctgcgttattgg
gtgactgagtttcatgtagatgggttttgtttcatcaatgcttcttctctcttgagaggc
gtccacggtgaacaactttctcgtcctcccttggttgaagcaatatcttttgatccactc
ctcgcggggacaaaactaatagctgactgctggaatccacgtgacatcaagatgccaaag
gaagtaaagttccctcactggaaacgatgggcggaactcaacacacgatactgtcgagat
gtaaggaactttgtgagtggaagaggccttcttagcgacctggctacaagagtttgtgga
agtggtgacatgttcacagatggaagaggtccggctttctccttcaactacatttcaaga
aactcagggctctctctcgttgacttggtcagtttcagtggccctgagctggtgtcagag
ctaagctggaactgtggggaagaaggagagacaaacaagtcagctgttctttagacaagg
ttgaaacaaatccgcaacttgttgtttatacagtacatttcacttggaatccctgtgctc
aacatgggagataaatgtggagtctctacaaagggctctcctttgctagaatcaaggaag
ccatttgactggaacatgttagcttctggcttcggtgcacagatcactcagttcatcctt
ttgttgacttcagttagagcaaggagaagcaatgtgtttcaaaggaataagtttttgaaa
cctgagagcattgtttggtatgcgaacgaccaaacaacaccgaattgggaagacactgct
tcaagatttttggcattggggatcaaaacagattcaggggaagaaacgaccgagctaaag
aacaatgatctgttcattggattcaatgcaagtgatcgtcttgagaaggtgatattacct
tcactacccgaaggaagaagcaaatggaggcgattggtggacacagctcttcctttcccg
gggtttttttctgttgaaggagagaccgttgtaacagaggatgaactggtagtgtatgag
atgaagccgtacagttgtaccctttttgaaaccatcaattctactgcttag
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