Brassica oleracea (wild cabbage): 106312680
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Entry
106312680 CDS
T04124
Name
(RefSeq) Fanconi anemia group D2 protein homolog
KO
K10891
fanconi anemia group D2 protein
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106312680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boe03400
]
106312680
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
106312680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
106312680
NCBI-ProteinID:
XP_013605740
UniProt:
A0A0D3DLW2
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All DBs
Position
C8:13658126..13667267
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AA seq
1475 aa
AA seq
DB search
MVFLSRKKPPPPPPSSSSAPPPKFPQPQKKSTDEPDAVEKMTAILAEAGCTLNNPYGPPC
LPSDLHAFRRHLTTRFSSCSAERDSVSDLRSVFVAGFSSYVQSPSNLRRVLSTCSSTKRD
DSLVRNLLLVSPIQLDLQETLLEKLPEYFDVVSGCSLEEDVARLIINHFRWLDFIANPDV
FTDKLMEVLSISPPHLKKEIIGSLPEIIGDHISRAVVDSLEKMLQEDSSVVVPVLDSFSN
LNLDDQLQEQALTVAISCIRTIDAEHMPYLLRFLLLAATQANVRRIISQIRQQLKFTGIS
QPCASQNKLKGKAPAYNSEGSILHALRSSLRFKNILCQEIIKDLNGLEKPRDFKVIDIWL
LILMYMNGDPIRKSIEKIFKKKVVDGCIQEALLDQCICGNKEFVKDNFGSFISLAEHLLS
SKEEKAREFGSHIYTRLFEGFADNYSRQEILGALVTHVGSDNKFEVSSVLEMMTVLVKKY
AQQLLPFSSHINGILDYLEGFTVENLHKVYEVFSLLALSARASPDSFRSSVSNELMMIVR
KQISHPELKYQKMGLVGTLRIVSSLGDATSVPDCSSSQVSDCGEILELLKTSVDSCRQSN
LALIIFYDEFAAILNQKLLQPEIMEWIGKHLGEFESLFLADLDNGEMANKSSYSGLEGDL
WMNLDGSISPICLNILALASSSSESCCLQILPSNFLLLSSVERLTNGGSLAGIDALLGCP
LHLPSSKYFAAAGWQSLTKKQREILSLSLYYAANWIRELLNAFSSQIDKRDGCISQATEK
DVTTKLLMRLRNLIFLESLLNNLITLSPQSLPELHPYSATSQHTEHPERKNEKRKLQDDD
ASQRKGNMKNKFKKSKQPSVDEHLRQPTILDAFKKAGVVTSQTQLHENPSPSSLDGRIAS
GSMHETCSGDESLSVKIPQLSPALAAQRFKFRPLLPQCLSILKFPKVQSQNIRNPEYKTE
LPLYLYLLQDLHTKLDSLVPPGKLLPFKRGSPPGNLGRFKLVELVSQIKGLFPSLRMHLN
TAMSLLIKGEETSQTIWRDEFAKAGNPNTSNIVVSDSLIYTMVCKEVLLCFSKMLTLPGF
ETDKSLLLDLLEAFQPTDIPVDSFADLQPFPSPGTKDYLFIGVYCFFEDILNNACSFSFD
LAFECLLTLQLVVTSAQKYIGKVSEEVIKKRCVGPIQGLVPSLHAKLGTSAEKLLRHEWI
DETTDNKGLKNKCEMVQNILRIYLETSGSTSDLLDELACTILPQASLSKSTGEDDAHDHE
FPTLCSATFRGWYKTLHEENLAILNKLVKVVSSEKRQNCQSEATEAHLRDIQKTVNVIVS
LVNLCRSHDKVTIHGMAIKYGGKYVDSFLKVFDFLEAHIQDHNELVIQLVKDLQKATRTL
QTLCSEAKGMKQTAITSKIPATKRSLERFLFHVKALLHTTSRGSNFWMGSLKHKDLRGQI
VSSQAYVDNETDEVEEETMSGGEDPMEADELPLSP
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctctctcgcaaaaagcctccaccgcctccgccatcttcctcatctgctccg
cctcccaaattcccccagccgcaaaagaaatccaccgatgaacccgacgcggtggagaag
atgactgcgattctagcggaagctggctgcacactgaacaacccgtacggtcctccatgt
ctcccctccgatctccacgccttccgccgccatctcacgactcgcttttcgtcttgctcc
gccgagagagatagcgtcagtgatctccgctcagttttcgtagctggattctcatcgtac
gttcaatctccgagtaatcttcgtagagtactttccacttgttcatcaacaaagagagac
gactcattagtccgtaacctcctccttgtgtctcccatccaacttgatctacaagaaacg
cttctcgagaagcttccggagtacttcgacgtcgtttctggatgttcccttgaggaggat
gttgctcgcctcatcatcaatcatttccgttggctcgacttcattgctaatcccgatgtg
ttcaccgataagctgatggaagttctatcgatctctcctccgcacttgaagaaggagatc
attggatcgttgccggagattattggggatcacatctctcgtgctgtggttgattctcta
gagaagatgcttcaggaggattcttctgttgttgttccagttcttgattctttctctaac
ctcaatttagatgatcaattgcaagaacaggcgcttacagtagcgatatcatgtattaga
acaatcgacgcagagcatatgccgtatctacttaggttcttgcttcttgctgctactcaa
gcaaatgttagaagaataatctcccagatacgccaacagttgaagttcaccggaatctca
caaccttgtgcttctcaaaacaaactcaaaggaaaagcacctgcatataattcagaaggt
tctattctccatgctttgagatcaagccttcggtttaagaatatactctgtcaagaaatc
ataaaggacctgaatggtctggagaaacctcgagatttcaaggtaatcgatatatggctg
cttattctcatgtatatgaatggggatcccatcaggaagagcatcgagaagatatttaag
aagaaagtggttgatggatgcatacaagaagccttgcttgatcaatgtatatgtggcaat
aaagagtttgtgaaggataattttggatcgtttatttctttggctgaacacctcttgtca
agcaaagaagaaaaagcaagggagtttggctcgcatatctatactcgtctttttgaagga
tttgctgacaattattccagacaagagatactaggtgccctagtgacacatgtgggatct
gataacaaatttgaggtcagttcagtcctagagatgatgacggttctggtgaaaaaatat
gcacagcaactccttcccttttcttctcacataaatggtattttggactacttggaggga
tttaccgtggaaaatttgcataaggtctatgaggttttcagtctcctcgcactatcagct
cgtgcaagtcctgattcttttcgatcttcagtttcgaatgaacttatgatgatagtaagg
aagcagattagtcatccagagctcaagtaccaaaagatgggattagttggaactctaagg
attgtttcatcacttggggatgcaaccagtgttccggactgttcatcatctcaggtttca
gattgtggggagattttggagctcttaaagacatctgtagactcttgcagacagtctaac
ttagccctaattattttctatgatgagttcgctgccattctcaaccagaaactacttcag
ccagaaattatggagtggattgggaagcatctgggagaatttgagtcactatttctggcc
gatcttgacaacggagaaatggctaataagagttcatattctggactagaaggggatctt
tggatgaacttggatggtagtatatcaccaatctgtttgaacattttggccctggcatct
tcatcctcagagtcttgttgtctgcagattcttccttcaaattttcttttgctatcatct
gttgagaggttgacaaatggtggatcccttgctggaattgatgctctgctcggatgccct
ttgcaccttccttcttccaagtactttgctgcagctggatggcaatctctgacaaaaaag
cagagagaaattctctctctctctttatattatgctgcaaactggatacgagaactcctt
aacgccttcagttcccaaattgacaaaagggatggctgcattagtcaggctacagaaaag
gatgtgacaacaaagcttctgatgcgactcagaaatctaatattcttggaaagcttattg
aacaatttgattacgctatctcctcagtctctaccggagctccacccttattcagccaca
agtcaacatactgagcatccagagaggaaaaatgagaagaggaaactacaagatgatgat
gcttcccaacgcaagggaaacatgaaaaataaattcaaaaaatcaaagcagccaagtgtt
gatgaacacttgcgacagccaactattttggacgctttcaagaaagcaggagtagttacg
agtcaaacacagctacatgaaaatccttccccttcatcgttagatggcaggatagcgtca
gggtcaatgcatgaaacttgttctggtgatgaatctctaagtgtaaagattcctcaactt
tccccggcccttgcagcccaaagattcaaattcaggcctcttcttcctcaatgcctttcc
atcctaaaatttccaaaggtgcagagccaaaatatacgaaaccctgaatataaaactgag
ctacccctgtatttgtatctcttacaagatcttcataccaagctggatagtcttgttcct
cctggtaaactacttcctttcaaacgtggaagccctccaggaaatttagggaggttcaaa
ttggttgaacttgtcagtcaaataaaaggactttttccaagcctcaggatgcatttgaat
acagcaatgtccttactgataaaaggtgaggaaacttctcaaactatttggagagatgag
tttgctaaggcgggaaatccgaacacatccaatatagtagtgtctgattctctgatttac
acaatggtgtgcaaagaagttttattatgtttcagcaagatgttgaccctccctgggttc
gaaacagacaaatcgctgctactggatcttctggaagccttccagcccaccgacattcca
gttgatagcttcgcggatctgcaacctttcccttcacctggaacaaaggactacttgttt
attggcgtctattgtttctttgaagatattttaaacaacgcttgttctttctcgtttgat
ctggccttcgaatgtcttctaactctacagttagtggtgacctcagcacaaaaatatatt
ggtaaggtatctgaagaagttattaagaagagatgtgtaggtcccattcagggtcttgta
cccagcctgcatgccaaactgggaacttcggctgagaaacttctcaggcatgaatggatt
gatgaaactactgataacaagggtttgaagaacaaatgtgaaatggtgcagaacatattg
cgaatatacctggaaaccagtggatccacatctgatttgctcgatgaacttgcttgtacc
attttgcctcaggcctctctatccaagtcaacaggagaagatgatgctcatgatcatgaa
ttccctacactatgttcagcgactttcagaggatggtacaagacattgcatgaagaaaat
ctcgcaattctcaacaaactggtgaaggttgttagctcagagaaacggcaaaactgtcaa
tctgaagctaccgaagcacacttaagagacattcagaagactgtaaatgtgatagtgtct
ttagtcaacttgtgtcgctcgcatgataaggttacaatccacggaatggctatcaagtat
ggtgggaagtatgtggactcatttctaaaagtttttgatttcctggaagcacatattcaa
gatcataacgaattagtcatccagctggtcaaagatctccaaaaggctacaagaacatta
cagactctatgttctgaagctaagggtatgaaacaaacagccatcaccagcaaaatacca
gcaacgaagcgatctttagagcgctttctgtttcacgtgaaggctcttctccatacaacg
tcacgcggctccaacttctggatgggtagcttgaaacacaaggacttgagaggacaaata
gtgagttctcaggcttatgtagataacgaaacagatgaggtagaagaagaaaccatgtcc
ggaggagaagatcccatggaagcggatgaacttcccttgtcaccttaa
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