Brassica oleracea (wild cabbage): 106312686
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Entry
106312686 CDS
T04124
Name
(RefSeq) tRNA (cytosine(34)-C(5))-methyltransferase-like
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106312686
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
106312686
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106312686
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Ortholog
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GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
DUF7082
Motif
Other DBs
NCBI-GeneID:
106312686
NCBI-ProteinID:
XP_013605752
UniProt:
A0A0D3DW16
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Position
C8:35439869..35443883
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AA seq
807 aa
AA seq
DB search
MGRGRHRGRSQRKHFKESRENVWKRPRTDPTVDASDNAVADKPSWEPILTDNPNFEEYYK
EQGLVRAEEWDVFMEILRKPLPAAFRVNSNSQFCDDIISILENDFVKSLQAEAIEGGELE
AIKPLPWYPKNLAWHSNFSRKQIRKHKTLERFHEFLKLENEVGNITRQEAVSMVPPLFLD
VHPDHFVLDMCAAPGSKTFQLLEIIHGASEPGTLPNGMVVANDVDFQRSNLLIHQTKRMC
TSNLIVTNHEGQQFPGCRLNKSRASEKGLSEDMPINQLSFDRVLCDVPCSGDGTLRKAPD
IWRKWNSGMGNGLHSLQVILAMRGLSLLKVGGKMIYSTCSMNPVEDEAVVAEILRRCGDS
VELVDVSDKLPELIRRPGLKTWKVRDKGAWFTSYKDVPQNRRGGVLVSMFPFGKNLKETS
ETTEENENENENVGCKETDKSVVDAIPDEPVVEVSDLPLERCMRIIPHDQNTGAFFIAVL
RKVSPLPEFQEKPNPRKHSSNKTADSTEKSPAEEAVVTADAEPVESPVEKVIEADADIEK
DVSLVEPEKEKNTEGETIKEEKEANSSSHAGDKRKVPMQGKWKGFDPVVFLKDETLIDSI
KEFYGIRDESFPLYGHLVTRNTDTSSVKRIYYVSKSVKEVLQLNFAVAQQLKIASVGLKM
FERQTAKEGGSKPCSFRISSEGLPVILPYITKQVLYSPMADFKHLLEYKSIKFPDFVNKQ
LGQKAIDLVLGCCVVILSDGEEPVKVDASTIAISCWRGKNSLGVMVTSADCQELLERLAE
RTPKTEVGSVNGSYGDSGGPAEPMETA
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaagacacagaggccgttcccagaggaaacatttcaaagaaagcagagag
aatgtctggaaacgccccaggaccgatcctaccgtcgacgcttccgacaacgccgtcgct
gacaaacctagctgggaacctatcttgaccgacaaccctaacttcgaggagtattacaag
gaacaagggttagtgagagcagaagagtgggatgtgtttatggagattcttcgtaagcct
ttgcctgctgcgtttagggttaactccaatagccagttttgcgatgatattatatcgata
ttggagaatgacttcgttaaatctcttcaggctgaggctatagaaggtggtgaattggag
gctattaagccattgccttggtatccgaagaacctcgcttggcattctaatttttctaga
aagcagattaggaaacataagacacttgagaggtttcatgaatttctgaaattagaaaac
gaagttggaaacattaccaggcaggaagctgttagtatggtacctcctctcttcctcgac
gtacatccagatcattttgtacttgacatgtgcgctgcaccaggttccaaaacatttcag
ctgcttgagattatacatggagcatcagaaccaggaactctacctaatggaatggtggta
gctaacgatgtagatttccaaagatctaaccttcttatccatcaaacaaagagaatgtgc
acatcaaacttgatagtgactaatcatgaagggcaacagtttcctggatgccgcctgaac
aagtcccgagcgtcagagaaaggactaagtgaagatatgcccattaatcaactttccttt
gaccgtgttctgtgcgatgttccgtgcagtggtgatggcacactgcgcaaggctccagac
atctggcggaaatggaactcaggaatgggcaatggacttcatagcctacaggttattctt
gctatgaggggtttgtcgctgttgaaagttggtgggaaaatgatatactcaacctgctca
atgaacccagttgaggatgaagctgttgttgctgagattctaaggaggtgtggagactct
gttgaacttgtagatgtttccgataagcttcctgaacttatacgaagaccaggtcttaag
acatggaaggtgcgtgataaaggtgcgtggtttacttcttacaaagacgttccacaaaat
cggagaggcggagttcttgtgagcatgtttccttttgggaagaacctcaaggaaacgagc
gaaacaactgaagagaatgagaatgagaatgagaatgttggatgcaaagaaacagataag
tctgtggtggatgctattcctgatgaaccagttgttgaagtctctgatcttccgcttgaa
cgatgcatgagaataatacctcatgatcaaaacactggagcctttttcatcgctgtcctt
cgcaaagtttcacccttgccagaatttcaggagaaaccaaatccgagaaagcactcatct
aacaaaactgctgactcgacagaaaagtccccagctgaagaagcggttgtcactgctgat
gctgaaccagtagagagtccagtagaaaaagttatagaagcagatgcagatattgagaaa
gatgttagcctggtggagcctgagaaggaaaaaaacacagagggagaaaccatcaaggaa
gagaaagaagccaacagctcgagtcacgcaggagacaagagaaaagtacctatgcaaggg
aagtggaaaggctttgaccctgttgtcttcctcaaagacgagaccttgatcgatagcatc
aaggagttttacggtatcagagatgagtcattcccgttgtatggccacctcgtgacgaga
aacaccgacacaagcagcgtgaagaggatttactacgtttctaaatctgtcaaggaagtt
cttcagctgaatttcgcagtcgcacagcagcttaagattgcttccgttggcctcaagatg
tttgagaggcaaacggcgaaagaaggtgggagcaagccttgctcgttccgtatctcatct
gaggggctacctgtgatccttccatacatcaccaagcaagtcctctacagtccaatggca
gacttcaaacatcttctggaatacaaatctatcaagttcccagattttgtcaataaacag
ctgggacagaaagcaattgaccttgtcctgggatgctgcgtggtgattctcagcgacggt
gaagaaccggtgaaggtggatgcatcaacaatagccataagttgctggcgagggaagaac
agtttgggtgttatggtaacttctgctgattgccaggagctgctagagagacttgccgag
agaacacccaaaaccgaagttggctcggtaaatggaagttacggcgattcaggcggtcct
gctgaacctatggagacagcttaa
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