Brassica oleracea (wild cabbage): 106312865
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Entry
106312865 CDS
T04124
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106312865
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
106312865
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106312865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
106312865
NCBI-ProteinID:
XP_013605999
UniProt:
A0A0D3EBI2
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Position
C9:complement(38758294..38761968)
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AA seq
656 aa
AA seq
DB search
MVLTRSKKRVAKSQTPPLKRKAEKPQALALKKGGAKSQKTPPLKKQKKEVVEEDPSENDD
EEVSDDAASTDVESEESDDGEEEGLGSSGFFSDDDGEENDDDGEELLGDDFLEGSGDEEE
HSDSGSGSDSDSDEGDIEKESKLIDEEEAKEEEDAKAELLDFNKEAGDDSFRLPTEEELE
EEARGPPDLPLLQSRIKEIVRALSNFSVLRPNGASRKDCVEQLKSDIASYYGYNSFLIGA
LFELFPPVELMELIEAFEKQRPTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLV
VYDSQVPIGATPEYLAGFYMLQGASSFLPVMALAPQENERIVDVAAAPGGKTTYVAALMK
NTGLIFANEMKVPRLKSLTANLHRMGVTNTIVCNYDGRELPKVLGEKSVDRVLLDAPCSG
TGVISKDESVKVSKSLEQIRKFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENE
AVIDYALKKRSVQLVKTGLDFGQDGFVRFREHRFHPSLNKTKRFYPHVHNMDGFFVAKLK
KMSNMKQASEDDDEALGTVDEADVPSDDDEADVPSEGMEKQPSVPKKQQPKKTKESKEGL
AKSKESKKGKKSKSKKGEDPPKIKKQRKNRTEMRMEISQAREEKRRAMREKSKEKQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggttctcactcgtagcaagaagagggtggcgaaatctcaaacccctccgttgaagagg
aaggcggagaagccccaagctctggcgttgaagaagggaggagccaagtcccagaagaca
cctccgttgaagaagcagaagaaggaagtcgtggaggaagatcctagcgaaaacgacgat
gaagaagtttccgatgatgccgcctctaccgatgtagaatcagaagagtctgatgatgga
gaggaagaagggttaggctcttccgggtttttctccgatgatgatggagaagagaacgac
gacgacggtgaggagctcttgggtgatgactttcttgaaggtagcggcgatgaagaggag
cattcggattcgggttcgggttcggattctgactccgacgaaggcgatattgagaaggag
tctaaacttattgatgaggaagaagcaaaggaggaggaagacgctaaggctgagctgctt
gatttcaacaaggaagctggagacgattcgtttcggttaccaactgaagaggaacttgaa
gaagaagctcgtgggccaccagatctacctctacttcaaagtagaatcaaagagattgtt
agagctctgtcaaactttagcgtcttgaggccaaatggagccagcaggaaagattgtgtt
gaacagctcaaatctgatattgcttcttattatggctacaacagttttcttattggagct
ttgtttgagctgtttcctcctgttgaacttatggaattaattgaagcctttgaaaagcaa
aggcctacatctatccggacaaacacactcaagactcgaagaagggatcttgctgatgtg
cttctgaacagaggagtcaatcttgacccactaagcaagtggtcaaaagtcggacttgtt
gtttatgattcacaagtgccaatcggtgcaacccctgagtatttggctggattctacatg
cttcaaggtgctagttcgtttttgccagtgatggcccttgcccctcaagagaatgagcgt
attgtggatgtagctgctgctcctggtggtaaaactacgtacgttgctgctctaatgaaa
aatactggcttgatatttgcgaacgagatgaaagtacctaggctcaagtcgttgactgcc
aatctgcaccgcatgggcgtcacaaataccatagtctgtaactatgatggaagagagcta
cccaaggtgttaggtgagaaatcggttgatagagtattgttggatgcaccttgcagtgga
actggggtcatttcgaaagatgaatcagttaaagtttccaaatctctggagcaaattagg
aaatttgctcacttgcaaaagcaacttttacttgctgccattgatatggtggatgccact
tccaaaaccggtggatatattgtgtactcaacatgttcacttatggttgctgagaacgaa
gctgtcatcgattatgctctcaaaaagaggagtgttcaactcgttaaaactggactcgac
ttcggccaagacggatttgtaagatttagagaacatcgatttcatccatctttaaacaag
accaaacgtttttatcctcatgtacacaacatggatggattctttgttgcaaagctaaag
aaaatgagtaacatgaaacaagcttcagaagatgatgacgaggcgttaggaactgtagat
gaagctgatgtgcccagtgatgatgatgaagctgatgtgcccagtgaagggatggagaaa
caaccttctgttcccaagaagcagcaacccaagaaaactaaagaaagcaaggagggactt
gcaaaatcaaaggagagcaaaaaaggcaagaaatcaaaatctaaaaaaggtgaggatcca
cctaaaataaagaagcaaaggaagaacagaactgaaatgaggatggagatttctcaagct
agggaagagaaaagaagagcaatgagagagaagtcgaaggagaagcaataa
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