Brassica oleracea (wild cabbage): 106312870
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Entry
106312870 CDS
T04124
Name
(RefSeq) uncharacterized protein LOC106312870
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106312870
03036 Chromosome and associated proteins [BR:
boe03036
]
106312870
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
106312870
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106312870
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106312870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
DUF5917
Motif
Other DBs
NCBI-GeneID:
106312870
NCBI-ProteinID:
XP_013606006
UniProt:
A0A0D3A3U7
LinkDB
All DBs
Position
C1:complement(6155699..6164838)
Genome browser
AA seq
1794 aa
AA seq
DB search
MGSSVITSLSLSFKQVPPTAVPAFLDCVLSSIGVSPSSLFDSLIKELPFHTEEKKFDSDD
CNHIASLVAGLCHLLKSSVFGNEDNHNALQLFVWRVFIPLMKMVRAYDLDMLNKIIQSFF
DVVVETSALGILRVSLVPFLLRSVGVSMGMLQHEESDFIRWGELLLGGSLDINDKDENYV
GSLSESFPIPLSCHLLNLILNAAFQSRQEAPEAEDFAAGLLWDLCNTTERLLSQSVEHRS
CAVSFLLPAIFKPLSSLKISLQGNVYILSRNGFKKRIWECCKKLFSVGSIERRDAYSVLS
LCLSSDGALSYVSEKDPVEFDFRSDQEFWEEIKKGLVFDESLVRKQSLHILKSVLSISEV
SKTSSEKKPEGNSVHRALTKKEMWAEKEAKSLGVGELYGSVESALTSQQQQWQAFVLLYE
MLDEYGTHLVEAVWSNQIDLLIKSSFRYEETPDEETEIFNWLEVLWNRGFRHDNPLVRCT
VMESFMGIEWRRYKTCTQSMSQTFVLGPFIEALNDSVHHKDFGLKRIYTSRTIEGAAQYV
CAYTSCLNPRNRIGFLINLASLAKKQSFGRAGFMALVQCIVSTAYVVGGYGNKEMEHLEN
GFSGTPLEPSSEHLSQDEMSHILDVLKFVAESSRQHFNHKYRTRVCQKVLETAVSVVNPC
EVPLGTLLQFVSAIPREFTDHNGSLRKTMLEWLQGCNRNTSDSLCTDGTRLVASLHEYLK
EFVSDHVEGFDDEDLEAWESQTKRWARVFFLTVNDEEHLADIITFVQNSGVSFFQEKNHL
ERAPAKLLIFILSMLLELQNMQDGVSELSSSVKSKSCGIVEENGKQIVGSASVINEKFAA
VLLSILKQLVSFADSSCSIFWSHTTVENGVLSGSIIGKLGGPSQRRLSVPTTTAVLEAVT
SVKIIGLISSYCGQVTSGVTELKLALAFFWKFVQHTLSSQNCNSEAEAEIYLAAFEALAA
VLNAFVSLCSARAFNLLENDNTLLDMVNGEYWLQASVPAFLHNVNHLLTAGLLARSRRAV
LLSWKWLCVESLLSVMNVLDVRRIPGDRTSFFSDDTVKSIFYDIVESLENAGEGSALPML
KSVRLALGILASGKSSLDGFSGVDTQTMWQLVKSCWILHISCKKRRVAPIAALLSSVLHS
SLFSNKDMHVAEDGDRPLKWFVEKVLEEGQKSPRTIRLAALHLTGLWLMYPRTIKYYIKE
LKLLTLYGSVAFDEDFEAELSDNSDARTEVSLLAKNPDPELTEVFINTELYARVSVAGLF
QKLADLANMAEPACQNEDYQDAIVAGKLFLLELLDAAVHDKDLAKELYKKYSAIHRRKIR
AWQMICIMSRFVSNDIVGQVMDSVHICLYRNNLPAVRQYLETFAINIYLKFPPLVKEQLV
PILQNYDTKAQQALSSYVFIAANVILHAEKMAQQTNLRELLPPIIPLLTSHHHSLRGFTQ
LLVHRVLFRLFPPLESTSSQTILLEKLSFENLKSYLDKNPDCSRLRSSMEGYLDAYDPTT
SATPAGVFVNRVEESEFECVPTCLMDNVISFLNDVREDLRASMAKDIVTIKNEGFKIEEE
PNRRLMTSTSDEERLSEPSSLDFQKKITLAKHEKQDASSTSVLQNGETYKRLFEMEKEDE
LVSQLLRSRSMEVERLKSGRQSLILVASLVDRIPNLAGLARTCEIFKASGLVVGDASIIH
DKQFQLISVTAEKWVPIVEVPVNSLKLFLEKKKREGFSILGLEQTANSVSLDKYQFPKKT
VLVLGREKEGIPVDIIHVLDACVEIPQLGVVRSLNVHVSGAIALWEYTRQQRIQ
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctctgtgattacttcactgtcgctgagcttcaaacaagttcctccaacagct
gttcccgcttttctcgactgtgtcctaagctccataggcgtgtctccctcctccctcttc
gattcactcatcaaagagttgccttttcacacggaggagaagaagtttgattctgatgat
tgcaaccacattgcttcgttggtggctggtctttgtcacctactaaagagttctgtgttt
ggtaatgaggataatcataatgcgttgcagttgtttgtgtggagagtgtttattccactt
atgaagatggttcgtgcttatgacttggatatgcttaataagataatacaatcgttcttt
gatgttgtggtcgagactagtgcattgggtatattaagagtgagtttggtgccttttcta
ctgagatcagttggggtttcgatgggaatgcttcaacatgaagaatcggatttcatcagg
tggggagagctgttgcttggtggctctttggatataaatgataaggatgaaaactacgtt
ggatctttgtctgagtcatttccgattccactgtcgtgccatcttttgaatctgatactg
aacgctgcttttcaaagtcgccaagaagctccagaggctgaggattttgcagctggtttg
ctttgggatttgtgtaatactactgagaggcttttgtctcaaagtgtggagcatcgttcg
tgtgctgttagtttcctcctccctgctattttcaagccgttgtcttctctgaagatctca
cttcaagggaatgtgtacatactttcaaggaatggcttcaagaaaaggatttgggaatgc
tgcaagaagctgttctcggttggatcaatagagagaagggatgcttacagtgttctctct
ttgtgtctttcttctgatggagccctaagttatgtctcagaaaaagaccctgtcgaattt
gactttaggtctgatcaagagttttgggaagaaatcaagaaaggcttggtttttgatgag
agcttagtaaggaagcagtcattgcatatactgaaatcagttttgtccataagcgaagtg
agcaagacgagttctgagaagaagccagaagggaactcagttcatcgtgctttgacgaaa
aaagagatgtgggcagaaaaggaagccaagtcacttggtgtgggagaattgtatggctct
gttgaatctgctttgactagtcagcagcagcagtggcaagcttttgtgctcttgtatgag
atgcttgacgagtacggcactcatctcgtagaagcagtgtggagtaaccagattgatttg
ttaatcaaatcatcgttcagatatgaagaaactccagatgaggaaactgaaatatttaat
tggttagaggttctttggaatcgaggctttcgtcatgataatcctctagtcaggtgcacg
gtcatggagtcttttatggggattgagtggagaagatacaaaacatgtacacaatcaatg
tcccaaactttcgttcttgggcctttcatagaggctttgaatgattctgtacaccacaag
gacttcgggctgaaaagaatctatacgtcaagaacaattgaaggtgcagctcaatatgtg
tgtgcgtacacaagttgcctcaacccaaggaatcggattggatttttgatcaacttggca
tctcttgcaaagaaacagtcttttggtagggctggatttatggctttggtacagtgtatt
gtgtctacagcatatgtggttggaggatacgggaacaaggagatggagcatcttgaaaat
ggattctctgggactcctctagaaccttctagtgaacatttaagccaagatgagatgtca
catatactggatgtcttgaagtttgttgcagagagcagcaggcaacattttaatcacaaa
taccgtactcgagtttgccaaaaagtgttggaaactgctgtttcagtggtgaacccttgt
gaagttcctcttggaacactattgcagtttgtttcagcaattcctcgggagtttactgac
cataatggttcattgcggaaaacgatgctagaatggctccaggggtgcaacagaaacact
tccgacagtttatgtactgatggcactcgtcttgtagcgagccttcacgagtatctgaaa
gaatttgtcagtgatcatgttgagggttttgatgatgaagacttggaagcatgggaatcc
caaacaaaacgatgggcaagagtatttttcctcacagttaacgatgaagaacatctcgcc
gatatcataacgtttgtgcaaaatagcggcgttagttttttccaagagaagaaccattta
gaacgagcacctgcgaagttgttaatctttattctgagtatgctcttagagctccagaac
atgcaagatggagtctctgagctgagttcttcggtgaaaagcaagtcatgcggcattgtt
gaggaaaatggcaagcagattgttggcagcgcttcagttattaatgaaaagtttgctgct
gttctcttatcgatactgaagcagctggtttcatttgctgattcatcttgctcaatattc
tggtctcacactactgtggagaatggtgttctgtctggttctatcataggaaaactaggg
ggtccaagtcaacgccggctatctgttcctactacaacagctgtactagaagctgtaaca
tcggtgaaaattattgggttgatctcgtcatactgtggtcaagtcactagtggtgttact
gaactcaaattagcattggctttcttttggaagttcgtccagcatacgctatcatctcaa
aattgtaattctgaggctgaagctgagatctatcttgcagcatttgaagcgctagctgct
gtactgaatgcatttgtgtccttgtgctcagctagagctttcaaccttttagaaaatgat
aatacattattagatatggtgaatggtgaatattggttacaagcttcagttccggctttc
ctccacaacgttaaccatcttctcacagcaggacttctggcaagaagtagaagggctgtt
ctgcttagctggaagtggctttgcgtggagtctctattatcagtcatgaatgttcttgat
gtcagacgtattccaggggatagaacgtctttcttctcagatgatacagtcaaaagcatc
ttttatgatattgtagagagccttgaaaatgctggcgagggttctgctctgcctatgctg
aaatctgtcagacttgctttggggatacttgcgtctgggaaatcatctcttgatggtttc
tcgggtgtagatactcagacgatgtggcagctggtcaaatcatgttggatattgcatatc
agctgcaagaagagaagggtcgcacccattgctgcgcttttgtcttcggtgttgcattct
tctttgtttagtaataaagacatgcacgtagctgaagatggagatcgaccgctgaagtgg
tttgttgaaaaagtacttgaggaaggtcagaaaagtccacgcacaattcgacttgcggcc
ttgcacctaacaggactgtggctaatgtaccctaggacgataaagtactacattaaagaa
ttgaagcttctgactctctatggctctgttgcatttgatgaggattttgaagctgagtta
tctgacaatagtgatgcaagaactgaagtatcgttactggcaaagaacccagaccctgaa
ctgacagaagtttttatcaacacggagttgtatgcacgtgtgtcagtcgctggtctgttt
cagaagctggctgatttggccaatatggccgaaccagcatgtcaaaatgaagattaccag
gatgctattgtggctggaaagttgtttctattggagcttcttgatgcagcggtgcatgat
aaagacttggcaaaagagctttacaagaagtatagtgctatccatagacgaaaaatacgc
gcgtggcagatgatatgcattatgtcgcgatttgtcagcaatgacattgttggtcaagtc
atggacagtgtgcacatatgcttatatagaaataacctgcctgctgttcgacaatacctg
gaaacatttgccataaacatctacctaaaatttccaccattggttaaagagcagttagtt
cctatactgcaaaattacgacactaaagctcagcaagctctctcgtcctatgtcttcatt
gcagccaatgtcatccttcatgccgaaaagatggctcaacagacaaatttgagagaactt
cttccaccaataattccgttattaacttctcatcatcacagcttacgaggtttcactcag
ttattagtgcatcgggtactctttagactgtttccccccttggagtccacatcctctcag
acaatactgttggagaagctttcttttgagaatttgaagtcttacctggacaagaatcct
gattgttcgagattgcgatcatcaatggaaggatatcttgatgcctatgatcccaccaca
tctgccactccggctggtgtttttgtcaatcgtgttgaggaaagtgagtttgaatgtgtt
ccaacatgcctcatggataacgtgatttcttttctgaatgatgttagggaagatcttcgt
gcttccatggcaaaagacattgttaccattaagaatgaaggcttcaaaatcgaagaagag
cccaaccgtcggttgatgacttccacatcagatgaagaaaggctttctgaaccatcttcg
ttggacttccagaagaagatcactctggctaaacatgagaagcaagatgctagttcaact
tctgtgctccaaaacggggaaacttacaagcggctctttgaaatggagaaagaagacgag
cttgtgagtcagctgttacgatctagaagcatggaggtggagaggttgaaatctggccga
cagagtttgatccttgtggcttcattggttgatcgtattcctaatcttgctggattagcc
cggacatgcgagatatttaaagcatcgggtcttgtcgttggagatgcaagcataatacac
gacaaacagttccaactaatcagcgtgactgctgagaaatgggttccaatcgttgaagtc
ccggtgaacagtttaaaattgttcttggagaaaaagaaaagagaaggcttctcaatcttg
ggactggagcagacagctaacagtgtgtctctggacaagtatcagttcccaaagaagact
gttttggtgctgggtcgggaaaaggaaggcatacctgtggatataatccatgtactggac
gcttgcgtcgagatcccacaactaggagttgttaggtccctcaacgtccacgtcagcggc
gccattgctctctgggaatacactcgccaacaacgcattcaatag
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integrated database retrieval system
