Brassica oleracea (wild cabbage): 106312948
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Entry
106312948 CDS
T04124
Name
(RefSeq) probable phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106312948
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106312948
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106312948
Enzymes [BR:
boe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
106312948
Amino acid related enzymes [BR:
boe01007
]
Aminoacyl-tRNA synthetase
Class II (U)
106312948
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106312948
Prokaryotic type
106312948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Cas_Cas02710
Motif
Other DBs
NCBI-GeneID:
106312948
NCBI-ProteinID:
XP_013606106
UniProt:
A0A0D3EF60
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All DBs
Position
C9:complement(48199961..48204094)
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AA seq
592 aa
AA seq
DB search
MPTVNVGRDRLFAALGESYTREEFDDLCFRFGIELDDVTTEKAIIRKEKHIEEEAGKDEE
TIYKIDIPANRYDLLCLEGIAQALRIFNKKQEIPTYRLSDVGKDSMLRMNVRSDQTSQIR
PFVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTYEALSP
KDVNFVPLKQTKSFRADELIEFYKSDLKLKKYLHIIESSPVFPVLYDSKRTVLSLPPIIN
GAHSAISLQTKNVFIECTATDLTKAKIVLNTMVTTFSEYCEKKFEIEPVEVKYDSGESYI
CPDLAVYDMEVPLSYITDLMGVSLEVEEVTSLLNRMQLRAERSTSSEGQCLVKVHVPPSR
SDVLHPCDVMEDVAIAYGYNNIPTRMPASIKPLPLNELTDLLRLEIAMNVYTEVLTWILC
SHKENFELLNREDDNSAVIIGNPRGADFEVVRTRLMHGILKTVGSNNKHPKPIKIYEIGD
VTLLDETKDVGASNRRHLAALHCGATSGFELIHGLVDRVMEVMGVPFKPDGDIIGYCINR
SEEPEFLPGRQASIICKGKHVGNFGIVHPEVLNNFDITDPCSFVEIDIEALL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcctacggttaatgtcggaagagatcgtttgttcgctgctcttggagaatcctacact
cgggaagagtttgatgatctgtgtttccgtttcggtattgagcttgatgatgttacaact
gagaaagcaataatcaggaaggaaaaacatatcgaagaagaagctggtaaagacgaagaa
accatctacaagattgatattcctgccaacaggtacgatttgctctgccttgaggggatt
gctcaagctcttcgcattttcaacaagaagcaggagatacctacatacaggctttctgac
gtcggcaaggacagtatgcttaggatgaatgttagatctgatcagacatctcagattcgc
ccttttgttgtctgtgctgttttaagaggggtaaccttcgatgaggctcgttacaacagc
tttatcgatcttcaggacaagcttcatcagaacatttgcaggcgaagatccctggttgct
attggaactcatgacttggatacattacagggccctttcacatatgaggctttgtcgcca
aaggatgtaaattttgtacctttgaagcaaactaagagcttcagggctgacgaactaatt
gaattctataagtccgatttgaagttgaagaagtatctacacataattgagagctcaccc
gtcttccctgttttatacgacagtaaaagaacggtgttgtccttgccacccattatcaat
ggtgcacactcagcaattagcctgcagacaaagaatgtgttcattgaatgcacagcaact
gatttgaccaaggccaagattgttttgaatacaatggttacaaccttttctgaatattgt
gagaagaaatttgagattgagcctgttgaggtgaaatatgacagcggagagtcatacatc
tgtccggatctagctgtctacgatatggaagttcctctctcttatatcactgacttaatg
ggagtctctttggaggtggaagaggttacaagtctgctgaaccgaatgcagttgcgtgct
gagagatcaacgtctagtgagggccaatgtctcgtaaaggttcatgtacccccaagcaga
agcgacgtgctccacccttgtgatgttatggaggatgtcgccattgcctatggttacaat
aacatcccaacaagaatgcctgcttcgataaaacctctgcctttgaatgagctcaccgat
cttctcagattagagattgcgatgaatgtgtacaccgaggttctgacatggatactgtgc
tcgcacaaggaaaactttgaattgctaaacagagaagatgacaattcagctgttataatt
gggaacccacgtggtgctgatttcgaggtggtaagaacgaggctaatgcatggaatactg
aagacagttggttctaacaataagcaccctaaacctatcaagatttatgaaataggggac
gtgaccttattggacgaaacaaaagacgtcggtgcatccaatcgccgccatctcgctgca
ctacactgtggtgctacttctggatttgagcttatacatggcctcgtcgatagagtcatg
gaagtaatgggagtcccatttaaaccagacggtgacattataggatactgtataaaccgc
tctgaagaacctgaattcttacctggtagacaagccagtatcatttgcaaagggaaacat
gttggtaactttggaatcgtgcatcctgaggttttgaacaactttgacatcactgatccg
tgctctttcgtggaaattgacattgaagctctcctttag
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