Brassica oleracea (wild cabbage): 106312973
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Entry
106312973 CDS
T04124
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106312973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106312973
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106312973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
106312973
NCBI-ProteinID:
XP_013606138
UniProt:
A0A0D3E799
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All DBs
Position
C9:complement(20755148..20757244)
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AA seq
427 aa
AA seq
DB search
MEMESSRKLFIGGISWETTEDRLREYFQSFGEVLEAAIMKDRATGRARGFGFLVFADPTV
AERVVLIRHVIDGKIVEAKKAVPRDDHVVLNRSNSSLQGSPGPATSKKIFVGGLASSVTE
AEFKMYFAQFGTITDVVVMYDHRTQRPRGFGFISFESEEAVDRVLQRTFHELNGKMVEVK
LAVPKEMALNPIRNQMNVNSFGSSRISALLMNDYTQGFSQSPISGYGVQPEVRYSPGVGG
NRGGFSPFGHGFGIELNFEPGHYGSGSSAGFGRPFSPGYAASQGRYGSQIESGARNNLWG
NGGGLGGYMSNSPISRSSFNGNSGMSSLGSIGDNWGGAARARSGYRSEGGGLSEGGGLGL
DAMRGVHVGGYSSGSSSLETESLYSDSAWLSPPAKAEERLGMGAFDFMSKGPAAGYINRQ
PNGGIAA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagtcatcacgtaagctcttcatcggtgggatctcttgggagaccaccgaa
gaccgtcttcgcgagtattttcagagcttcggcgaggttttggaggctgctattatgaag
gatcgagccactggtcgtgctcgtggcttcggtttccttgtcttcgctgatcctactgtc
gctgagagagtcgtgttgatccgacacgtcattgatggtaaaattgttgaggccaagaag
gcagttccaagagacgaccacgtagtattgaacagaagcaacagtagcctccagggatca
cctggcccagcaaccagcaaaaagatctttgttggaggcctcgcttcatcggtcactgaa
gctgagttcaagatgtattttgctcagttcgggacgatcaccgacgttgtggtgatgtat
gaccacagaacccagcgacctagaggctttgggttcatctcttttgaatcagaggaggct
gtagacagagttttgcagaggacgttccacgaactcaatggaaagatggttgaggtcaaa
ctggccgttcccaaggaaatggctctcaacccaatccggaaccagatgaatgtaaatagc
tttggcagtagtagaatcagcgcattgctgatgaacgactacactcaaggattcagccag
agtcctatctcaggttatggagtgcaacctgaagttaggtacagtccaggagtaggtggt
aataggggaggattctcaccgtttggacatggatttggaatcgagctgaattttgagcca
ggccactatggatctggttccagtgcaggctttggacggccctttagcccaggatatgct
gcgagtcaaggcaggtacggtagccagattgagtctggtgcaaggaacaacttatgggga
aatggtggtggtttaggaggttacatgtcaaactctccgatatctaggagcagctttaac
ggaaactctggaatgtcttcactaggcagcattggggacaactggggaggagctgcacgt
gcacgtagtggctatcgcagtgagggaggagggttaagtgagggaggagggttaggttta
gatgcaatgagaggggttcatgttggtggttacagcagcggctcaagcagcttggagaca
gaatctctgtacagcgactcggcgtggctttcgcctcctgcaaaggcggaggaaagattg
ggaatgggagcatttgacttcatgtctaaaggaccagctgctggatacatcaacaggcaa
ccaaacggaggtattgcagcttag
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