Brassica oleracea (wild cabbage): 106313210
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Entry
106313210 CDS
T04124
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03082
ATP-dependent chromatin remodeling
boe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106313210
03083 Polycomb repressive complex
106313210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106313210
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106313210
Histone modification proteins
HAT complexes
HATB complex
106313210
HDAC complexes
Sin3A-HDAC complex
106313210
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106313210
PRC2.2
106313210
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106313210
Heterochromatin formation proteins
Other heterochromatin formation proteins
106313210
Chromatin remodeling factors
NuRD complex
106313210
NuRF complex
106313210
NuRF complex (fruit fly)
106313210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_DCAF12
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
Ice_binding
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
106313210
NCBI-ProteinID:
XP_013606420
UniProt:
A0A0D3E3H6
LinkDB
All DBs
Position
C9:8898326..8901575
Genome browser
AA seq
505 aa
AA seq
DB search
MESDEAAAAAAAASPQASGGTVTPAPKKRGRKPKNKDESQEQISGGKMKESGKKTKQEEQ
SVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLDQATYKNRQRLYLSEQTDGSVP
NTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVAT
HTDSPDVLIWDVDTQPNRHAVLGAASSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDK
MVVLWSIQDHITTVGTDSKSSGSIIKQTGEGGDKTESPSVGPRGVYQGHDDTVEDVAFSP
TSAQEFCSVGDDSCLILWDARTGTSPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTV
RLYDRRSLTSNGVGTPIYKFEGHKAAVLCVQWSPDKASVFGSSAEDGLLNIWDYDRVSKK
SDRAAKNPAGLFFQHAGHRDKVVDFHWNAADPWTIVSVSDDCETTGGGGTLQIWRMSDLI
YRPEEEVLTELEKFKSHVMTCASKP
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgacgaagcagcagcagcagcagcagcagcgtctcctcaagcgagcggagga
accgtaacaccggcgccgaagaagagaggccggaagcctaagaacaaagacgaatctcag
gagcagataagcggtgggaagatgaaggagagcgggaagaagacgaagcaggaggagcag
agtgtggacgagaagtactctcagtggaaaggtctcgtccccattctctacgactggctc
gccaaccacaacctcgtctggccttccctctcctgcagatggggtccacaactcgaccaa
gctacctacaagaaccgccagcgtctttacctctctgaacaaactgatggcagtgtaccc
aacactctagtcatagcgaattgcgaagttgttaagccacgggttgctgcggctgagcac
atttctcagttcaatgaagaagcacgttctccatttgtgaagaagtacaagaccatcatt
caccctggagaggttaacagaatcagggaactcccgcaaaacagtaagattgttgctacc
cacaccgacagtcctgatgttctcatttgggatgttgatacccaaccaaaccgtcatgct
gtgcttggtgctgcaagttcccgtcctgatttgatactaactggacaccaagacaatgct
gaatttgctcttgcaatgtgcccaaccgaaccctttgtcctctctggaggcaaggacaag
atggttgttttgtggagtatccaggaccacatcacaacggttggtactgattccaaatca
tctggatcaatcatcaaacagactggtgaaggtggcgataagacagagagtccttctgtt
ggcccgcgaggtgtatatcaaggccatgatgatacggttgaagatgtcgcattcagcccg
actagtgcacaagaattctgcagtgtgggtgacgactcttgccttatactgtgggatgca
agaactggtactagccctgtcacgaaggttgaaaaggcgcatgatgctgatcttcattgt
gtcgattggaatcctcatgacgacaacctgatcttgacagggtctgcagacaacactgtc
cggttgtatgatcgtaggagccttacctcaaatggagttggtacacctatttacaaattt
gagggccacaaagctgctgttctttgcgttcagtggtctcctgataaagcatctgttttt
gggagttccgcagaagatggtctcttgaacatctgggattatgacagggtcagtaagaag
tctgatcgtgcagctaaaaaccctgcggggctcttcttccagcatgctggtcacagggac
aaagttgttgatttccactggaatgcggcggacccgtggactatcgtcagtgtttctgat
gactgtgaaactactggtggaggtggaacattgcagatatggcggatgagtgacttgatt
tacagaccggaagaggaagttctgacggaactggagaagttcaagtcgcatgtcatgaca
tgtgcctccaagccttga
DBGET
integrated database retrieval system
