Brassica oleracea (wild cabbage): 106313325
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Entry
106313325 CDS
T04124
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
boe04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106313325
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106313325
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
boe01009
]
106313325
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106313325
03036 Chromosome and associated proteins [BR:
boe03036
]
106313325
Protein phosphatases and associated proteins [BR:
boe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106313325
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106313325
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106313325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
106313325
NCBI-ProteinID:
XP_013606566
LinkDB
All DBs
Position
C9:2880314..2883650
Genome browser
AA seq
541 aa
AA seq
DB search
MSMVDAIVPGADMSRVDADLLQLQEMSSFVLTSKPGFTQSLFDQWLSLPQAHQQIASLLH
DALAGSTLNVASGSSSAASNSIPSMFPAGSAAPPLSPRSCGSPRMTRQRAGLSNLGSSLK
PTTIEPAKEPMPQFYFENGRPPPSEMKEQCMFRINHFFYGHMDGLQIQEFKLVTREICKL
PSFFSTSLFRKIDVNNTGFVTREAFIDYWVNGNMLIMDTTTQIFKILKQQNQNYIVKDDF
KPLLKELLATHPGLEFLQTTPEFQERYAETVTYRIFYYINRSGNGRLTFRELRRGNLIDA
MIHADQEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLMRYGNHALTFRIVDR
IFSQVGRKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEYWFNCIDLDGNGIITRNEMQF
FYEEQLRRMECMAQEAVLFEDILCQMIDMIGPENESHVTLQDLKGSKLSGNVFNILFNLN
KFMAFETRDPFLIRQERENPTLTEWDRFAHREYVRLSMEEDVEDASNGSAEAWDESLESP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggttgatgcgattgttcccggagcagacatgtctcgcgttgacgccgatttg
cttcagctccaagagatgtcttccttcgtcctgacctcaaaacctggattcacacagagc
ctcttcgaccagtggctctcccttccccaagctcatcaacagattgcatcattgcttcat
gatgcgttggctggatctactttgaatgttgcatctggttcgagttctgccgccagcaat
tctataccatcaatgtttcctgcgggaagtgctgctcctccgctttcgccgaggagctgc
ggctcacctcgtatgacgaggcagagagctggcctttctaacttaggctcttcgctgaaa
ccaacaaccatagagcctgctaaagagcctatgcctcagttttattttgaaaatggtcgc
ccaccaccaagtgagatgaaagagcagtgtatgtttagaatcaaccatttcttctatggt
catatggatggattgcagatacaagagttcaagttagtcaccagagaaatctgcaagctc
ccatctttcttctccacttcacttttcaggaagatagatgtcaacaacactggttttgtt
actagagaagcatttattgattattgggtgaacgggaacatgctgataatggacacaact
acacaaatctttaagatactaaagcagcaaaatcagaattacattgttaaggatgatttc
aaaccactacttaaagaactattggctacacatcctgggttagagttcctgcaaaccaca
cctgagttccaagaaagatatgctgaaactgtcacctacagaatattttactacataaat
cgatctggaaatgggagacttacttttagggagcttagaagaggaaacttaattgatgca
atgattcatgctgatcaagaagaagacatcaacaaagtattgaggtacttctcatatgag
catttctatgtcatatactgcaagttctgggagctggatacggatcatgatttccttatt
gacaaagaaaaccttatgagatatggaaaccatgctcttactttccggattgttgacaga
atattctcccaggttggaaggaagtttactagcaaagttgaagggaaaatggggtatgag
gattttgtgtatttcatacttgcggaagaagataagtcgtcagagcctagccttgaatac
tggtttaactgcatagacttggatgggaatgggatcattacgcgaaatgagatgcagttc
ttttatgaggagcagttgcgtcgaatggagtgtatggcgcaagaggctgttctttttgag
gatatcttatgtcagatgattgatatgatcggaccagagaacgagagccatgtaacgctg
caagacctgaagggctccaagctctctggaaacgtattcaacatcctgtttaatcttaac
aagtttatggcgtttgaaacacgggatccattcctcattcgtcaggagcgtgagaaccca
acattgacagagtgggaccgttttgcacatagagagtacgtaaggctttcgatggaagaa
gatgttgaagatgcatccaatggaagtgctgaggcttgggatgagtccctggagtctccc
ttctga
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integrated database retrieval system
