Brassica oleracea (wild cabbage): 106314204
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Entry
106314204 CDS
T04124
Name
(RefSeq) uncharacterized protein LOC106314204
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106314204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106314204
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106314204
mRNA degradation factors
5'-3' decay
Decapping complex
106314204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
106314204
NCBI-ProteinID:
XP_013607579
UniProt:
A0A0D3ABL4
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Position
C1:complement(32120001..32123605)
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AA seq
775 aa
AA seq
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MERSDSRDLYNFARASSADQKSSVFDASQYDFFGKNLDEMSLGGLDDDEAIAPVLGLADA
DAYADDEYHLFDKAEAPGLGSLSDMDDLATTFAKLNRVVTGPKHPGVIGDRGSGSFSRES
SSATDWTYDPELTSWLDERDQEANRWSAQPQSSAQPIYRTSSYPQQPPQLQHHNSEPIIL
PESAFTSFPPPASRSQHTSLGNLHRAPSLPGGSQFNFTPLSSSNSHLSGLPQWPQYSGNL
TRHASCGPTLGNMAQPHWFTDPGLLQQQHQQLPPRNDLLAQHMMALQQRQSYAQLAAIQS
QLYSSYPSPSSRKVPFGVGDVREQHKHKSSSHRSRKNKGISQQASSDAASQKSESGLQFR
SKYMTSEEIESILKMKHSNSHSNDPYVNDYYHQARLAKKSRATISHFYPSQLKDHQPRSR
NSSEQHQQVHVDALGKITLPYIRRPRALLEVDSSPGSNDKGSGKHLEQEPLVAARVTIED
ALGVLIDIVDIDRHLQSTRPQDGGALVKRKRQILLEGLATALQLADPFSKTNQTAKDDVV
FLRIATLPKGRKMLTKYIQLLVPGTEIARVVCMAIFRHLRFLFGGLPSDGLAAETVVSLA
KAVTVCVQAMDLRALSACLAAVVCSSEQPPLRPIGSSAGDGASIVLISLLERAAEVVVVV
PPRVNHDGLWRASFDEFFNLLTKYCRSKYETIRSQNQGSAADVLEVAIKREMPAELLRAS
IRHTSDDQRNYLLNFGRKPSAIISESASHATGGQINSESVRGLSKGEREVITNGA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggagagatccgattccagggatttatacaactttgctcgcgcttcctcagcagatcag
aagagttcggtctttgacgcatctcagtatgatttctttgggaaaaatcttgacgaaatg
tcattgggaggtttagacgatgatgaagcgatcgctcctgttctcggacttgctgatgct
gatgcttatgctgatgatgagtatcacttgtttgataaagcagaggctccaggtttagga
tcattatccgacatggatgatcttgccactacttttgcaaagctaaacagagttgttacc
ggacctaaacaccctggtgttattggtgacagaggttcaggatccttttcaagagagagt
tcttctgctacggattggacatacgatccagagctcacaagctggttggacgaacgagat
caagaggctaatagatggtccgcacagccacaatcatctgctcaaccaatttacaggaca
tcctcctatcctcagcagccaccgcagctccagcaccacaatagcgaaccaataatttta
ccagaatcagctttcacttcctttcctccgcctgctagcagatctcagcacacttcactt
ggaaatctccatcgtgctccttctcttcctggtggttctcagttcaattttaccccgctg
tcaagttctaattctcatctttcaggattgccgcagtggcctcagtacagtggtaatttg
actagacatgcctcgtgtggccccacgcttggtaacatggcgcaacctcattggttcact
gatcctggtcttctgcaacaacagcaccaacagttgcctcctcggaatgatcttttggca
cagcacatgatggccctccagcagagacaatcgtatgctcaacttgctgcgatacagtcc
caactgtatagttcctatccttcaccatcatcacgtaaagtccctttcggtgttggtgac
gttagggaacaacacaaacacaagtcatcatctcacagaagtcgaaagaacaaaggcatc
tcccaacaggcatcatcagacgcagctagtcagaagagtgaaagtggattgcagtttaga
tcaaaatacatgacttctgaagaaatagagagtatactcaagatgaagcactctaattcg
cacagcaatgatccttacgtcaatgactattaccaccaagctcgccttgccaagaagtct
agagcaacaatctcacacttctacccttctcagctgaaggatcaccagcctcggtctcgt
aatagttctgaacagcatcaacaagttcatgtagatgctcttggaaagattacacttcct
tatatccgcaggccacgtgcgttgctcgaggtggactcttcccctggctctaatgataaa
ggctcagggaaacatttggagcaggaacctcttgtggcagctagggttacaattgaagat
gcacttggagttcttattgacatagttgacattgacaggcatctccagtccacaaggcct
caggacggaggtgctcttgtcaagagaaagcggcagattctcctagaaggattagccaca
gcactccaacttgctgatccgtttagcaaaaccaatcagactgctaaggatgatgttgtc
tttctccgtatagcgactcttccgaagggccgtaaaatgcttacaaagtacatacagctt
ctggttccaggcactgagattgctcgagttgtctgcatggctatattccgccacttgaga
tttttatttggcggcttgccttcagatggtttagcagcagagacggttgtgagtcttgcc
aaagcagtcacggtctgcgtccaagccatggacctacgagcgctgagcgcttgccttgca
gctgtagtgtgttcctcagagcagccgcctctgcgtcctattggaagctctgctggagat
ggtgcttcaattgtcttgatatctcttctcgagagagcagctgaagttgtggtggtggtt
cctcctcgagtcaatcatgatggtctatggagagcgtcatttgatgagttcttcaacctt
cttaccaaatactgcaggagcaagtatgagacgatccgcagccagaaccaagggagcgca
gctgatgttttggaggtggcgataaagagggaaatgcctgctgagcttttacgagcgagc
atccgtcacaccagtgacgaccagaggaactatttgttgaactttggccgtaaaccgtcg
gctattattagtgagtcggcgtcgcatgcaacgggtgggcagatcaactctgaatctgtg
aggggtttatcaaaaggagagagagaagtgataactaatggggcttag
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