KEGG   Brassica oleracea (wild cabbage): 106315062
Entry
106315062         CDS       T04124                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03020  RNA polymerase
boe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106315062
  09124 Replication and repair
   03420 Nucleotide excision repair
    106315062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106315062
   03019 Messenger RNA biogenesis [BR:boe03019]
    106315062
   03400 DNA repair and recombination proteins [BR:boe03400]
    106315062
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106315062
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106315062
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106315062
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 106315062
NCBI-ProteinID: XP_013608288
LinkDB
Position
C9:complement(42088984..42089741)
AA seq 110 aa
MFFHIVLERNMQLNPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGNGLAL
PRTGPVRNGTAFVTFPLKYQCVVFRPFKGQILEAVVTLVNKMGFFAEAGL
NT seq 333 nt   +upstreamnt  +downstreamnt
atgtttttccacatagtattggagcgaaacatgcaattaaacccacgtttctttggtcgt
aaccttcgtgaaaacctggtctctaagctcatgaaagacgtggagggcacttgcagtggg
cggcatgggtttgtagtggccataactggaatagaaagcgtaggcaacggattggctttg
cccaggaccggccctgtccgtaatgggactgctttcgtcaccttcccccttaaataccag
tgcgtcgttttcagacctttcaaaggccagatcttggaagctgttgtcactctcgtcaat
aagatgggattcttcgcggaagctgggctttga

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