Brassica oleracea (wild cabbage): 106315949
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Entry
106315949 CDS
T04124
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106315949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boe03400
]
106315949
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
106315949
FA (Fanconi anemia) pathway
106315949
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Ortholog
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GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
DUF538
Motif
Other DBs
NCBI-GeneID:
106315949
NCBI-ProteinID:
XP_013609255
UniProt:
A0A0D3E223
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Position
C9:complement(5212613..5215907)
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AA seq
630 aa
AA seq
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MPRRRLRLQHYSDDDDDEEGEDEIGASGIGDSAQSVSRAPSVQPESSSASNLNPNPVEQT
TVSEVEIIDVSGNSTPSPPESSIPVDPSEAEVQNGYDSPIAEALSRMGIKLKTEWWVSCL
SWLEASVPEFSRLEVAAKAKHCFEQFLFCDMNLCGGGILPRNVASMVLEELAGPFVLQVD
EIVNIGCALKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRPIKDLQVLAPAGLKIVVSS
VQVRHGLLMLVPETIQVLGGMVEELEEARKRLVIEVNKPPRGIRTRNRGVASLATRASLA
AWSLNDNDTGNQVNSSTSGDASHVQANGQGNSANVTRTHISPRTMSNLPASINVEATFSR
VEHMQIDTAITHGERTFSGLHSTSSNIHTTASTPPTSCSGTRLFYNSGCENTLDQQTSNV
TSFVEEMHIDNGNVRDTTGPVYGSGSGAVADDEVSNMVVDLETPSVMSTNPETPFTYLAE
MSQNWAVMKDTMPFVQGRIKCFLTGVKRFQFKQQSTFELICYVDDGSLICEILLHNDVVQ
RRIGHSSMEVTAALTSSAPTRENAMMKEKLKGFQLFLADFEGMMVVEMNRTSQYPVAIEM
NQGCSSTDARLLFERIKSSGIAPPVVVLSP
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctagacgacggctgagactccaacactactccgacgacgacgacgacgaagaagga
gaagatgaaatcggagcaagcggaatcggcgattctgctcagagcgttagtcgtgctcct
tctgtgcaaccggaaagctcgtcagcgtctaatttaaaccctaatcccgtcgagcaaacc
actgtatcggaagttgagattatcgacgtctccggtaattccactccctcgccgccggaa
tctagtattccggttgatccgtcggaggcggaagtccagaacggctacgactcgccgatc
gctgaggctctctctcggatggggattaagctcaagacggagtggtgggtctcttgtctt
tcttggctcgaagcctccgttccggagttttcacgcctcgaagttgcggcgaaagctaag
cattgcttcgagcagtttctgttttgcgatatgaatctatgcggaggcgggattcttccg
cggaacgttgcgtctatggttcttgaagaactcgctggtccgtttgttcttcaggttgat
gagattgttaacattgggtgtgccctcaaagggagatatgaaaacgctaatgcagggctt
aagaggtgtttgaagctctctatgacagatggtgttcaacgtgtttttggtatggagtac
agacctattaaagatctgcaagtcttggctcctgctggtttaaagattgttgtgtctagc
gtacaagttagacatgggcttttaatgctagtacctgagactatacaagttttaggaggg
atggttgaagaattggaagaagcacgaaagcgtctggttattgaagtgaacaaacctcca
agaggaataagaacaaggaaccgaggtgttgcttcgttggcaaccagagcaagtctagct
gcgtggtcgctaaatgacaatgatactggtaaccaagtaaacagttctacctcgggagat
gctagtcacgttcaggccaatggtcaaggcaattctgcgaatgtaacgagaactcatatc
agtccacggacaatgagtaatcttcctgcttccatcaacgtggaagctactttttcgagg
gttgagcatatgcagattgatactgctattacccacggggaaagaacgttctctggtttg
cactcgacttctagtaacattcacacgacagcatccacacctcctactagctgtagtggt
acaagactcttttacaacagcggttgcgaaaatactttggatcaacaaacatctaacgtg
acttcatttgttgaagaaatgcatatcgacaatggtaacgtgagggatacaacgggtcct
gtatatggttcaggttcaggcgctgtagctgatgatgaagtcagtaatatggttgtcgat
ttggaaaccccctctgtgatgtctacaaatccggagacacctttcacttacttggccgag
atgtctcagaattgggcagtaatgaaagataccatgccttttgttcaaggaaggattaag
tgctttctaactggagtgaagagattccagttcaagcaacagtctacttttgagcttata
tgctacgtcgatgatggaagtcttatctgtgagatcttgctccataatgacgttgtacaa
agaaggataggtcattcatccatggaggtcacagctgcgcttacctcttcagcaccaaca
agagaaaatgccatgatgaaggagaaactaaaaggcttccagttgtttctagctgacttt
gagggaatgatggtggtagaaatgaacagaacgtcacaatatccagtagctattgagatg
aatcagggatgttcatcaaccgatgctcggttactatttgaaagaatcaaatcttctggc
atagctcctccagttgttgttttatccccttga
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