Brassica oleracea (wild cabbage): 106316061
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Entry
106316061 CDS
T04124
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106316061
03400 DNA repair and recombination proteins [BR:
boe03400
]
106316061
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106316061
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Atypical E3
106316061
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
106316061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
DUF2321
Baculo_IE-1
SLX1_C
zf-HC5HC2H
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
106316061
NCBI-ProteinID:
XP_013609379
UniProt:
A0A0D3EDJ2
LinkDB
All DBs
Position
C9:44590791..44592856
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AA seq
316 aa
AA seq
DB search
MVSLSWKHHTLIQALISRGPLKEKEFQSIFTAVTGRNPGAAKKIFDKYLLEINKELSYVH
FELRACRDQYDGQVCYGVVNTVSDDQSKLGTTYSVPQIAFFKGIIEAIAQDEAAQGCISG
FDALNIRLENQLPSEASSSQQQQAPAAFKNFSMSQKDKTLDELVRDKWLCRTSEGNIGLG
IRSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPNEGCTVRIHKYCLKNLLSQRDDKVCSG
CGKPWPLGKVTKEEAVEAAVDDEEENETQATTALRSKKRKQRSQRDSAENFSSQASLASS
GAATRRRVTRSAAHLN
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggtatctctaagctggaagcaccacacgctaattcaagctctgatttcgcgaggccct
ctcaaggagaaagagtttcaatccatcttcaccgccgtcaccggcagaaacccaggagct
gctaagaagatatttgataagtaccttcttgagatcaacaaagagctctcttatgttcac
tttgagctgagggcttgtagggatcagtatgatggtcaagtttgttacggagttgttaac
actgtctccgatgatcagtccaaactcgggaccacatattctgttccacagattgccttc
tttaaaggcattatagaagcaattgcacaggatgaagctgctcaaggttgcatatctggc
tttgatgccctcaatatccgattggagaatcagttaccaagtgaagccagcagcagtcaa
cagcagcaagccccagctgcattcaagaacttctcaatgtcgcaaaaggacaaaactctc
gatgagcttgtaagggacaaatggctgtgccgcacaagtgagggtaacatcggacttggt
atacgatctcttcttgacctgcgcagttggttcaggaacaatgatgttccctcttgtgag
gtttgcaatgaagctggtgttaaggcggatttgtgtccaaatgaaggttgtacagtccgg
atacacaagtactgcctcaaaaacttgttatctcaaagggatgataaagtttgctcaggc
tgcgggaagccatggcctttgggtaaagttacaaaagaagaagctgttgaagcagcagtg
gatgatgaggaggaaaacgagactcaagcaacaacagctttaaggtccaagaaaagaaaa
caaaggagccaaagagactcagctgaaaacttttcttctcaggcttctttagcctctagt
ggtgctgccactaggagaagagtaactcgtagcgctgcacacttaaattag
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