Brassica oleracea (wild cabbage): 106316062
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Entry
106316062 CDS
T04124
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 2
KO
K12184
ESCRT-I complex subunit VPS28
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106316062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106316062
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106316062
Membrane trafficking [BR:
boe04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
106316062
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106316062
Exosomal proteins of other body fluids (saliva and urine)
106316062
Exosomal proteins of colorectal cancer cells
106316062
Exosomal proteins of bladder cancer cells
106316062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
DUF7784
Motif
Other DBs
NCBI-GeneID:
106316062
NCBI-ProteinID:
XP_013609380
UniProt:
A0A0D3E834
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Position
C9:complement(23287273..23290147)
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AA seq
214 aa
AA seq
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MMMMMMEAKLWNDKREREMYDNFAELFAIIKATEKLERAYIRDLISPSEYESECNKLILH
FKTLSASLKDTVPSTQRFADTYKMDCPSALYRLVTSGVPATVEHRATVAASTSNSASIVA
ECVQNFITTMDSLKLNMVAVDQVYPLLSDLSASLSKLSILPPDFEGKTKIKDWLSRLSKM
GAADELTVQQSRQLHFDLESSYNSFMAALPKGGN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatggaggccaagttatggaacgacaagagagaaagagagatgtac
gacaacttcgcagagctcttcgcaatcatcaaagcaacagagaagctcgagagagcttac
atcagagacttaatctctccttcagagtacgaatccgaatgcaacaaactcatcctccac
ttcaagacgctctccgcttccctcaaagacacggtcccaagcacccaacgattcgcagac
acatacaaaatggactgtccatccgctctctaccgtctcgtgacatcaggtgttcccgcc
accgtggaacaccgagccaccgtggcggcatccacctccaactctgcctccattgtcgct
gagtgtgtgcagaacttcatcacgacgatggattctttgaaactaaacatggttgctgtc
gaccaggtctatcctctcttgtctgatctgtcggcttctctcagcaaactgagtattctg
ccgccggatttcgaagggaagacgaagatcaaagattggctttcgaggttgtcgaagatg
ggagcagctgatgagcttacggtacagcagtcgaggcaacttcactttgatcttgagtct
tcatacaactctttcatggcagctttgcctaaaggtggtaattga
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