Brassica oleracea (wild cabbage): 106316136
Help
Entry
106316136 CDS
T04124
Name
(RefSeq) uncharacterized protein LOC106316136
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106316136
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106316136
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106316136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
DUF4200
DUF4315
zf-RING_16
RINGv
zf_RING_Vps8
FIMAH
zf-C3HC4_3
zf-RING_Vps41
Surfac_D-trimer
zf-UDP
DUF7413
Motif
Other DBs
NCBI-GeneID:
106316136
NCBI-ProteinID:
XP_013609462
UniProt:
A0A0D3DZQ3
LinkDB
All DBs
Position
C9:complement(346446..349484)
Genome browser
AA seq
502 aa
AA seq
DB search
MAGENAAASAICSICYEDLKPAAENLQSISACGHVFHELCLQQWFEYCPSTNKRNCPICK
QKCYLKDPFRLYFQSSGNQIESQKVGGIEEDPVVLRGEVKRLEGKLQNLSSALEEQKKVN
VEVSDQLYQCKEKLKEDKVKRVEALQEVSTNQRLLKLKSEECVQLTSQCAQLQDRTMALA
KELASLKLVSDISLEEDDVLKLALLGNNAKTKDTIDTLVKSLVIRNRSYKELLAKCNQLG
RGEARSSEKLEKALEKMDKLKKRVRELEMITEENENKAIRDMIKASKNCSDRKVSKPATE
SLDRISTPLGKLEKNDGFTNHGSCLSGREDSFFGKRESVIVVDDDVHEATTLSGIRHSDS
TMEDEKGEDSNVQERRDDPVIKDIKFNIREGSTPSDSPCSNGAGGSWLSSGENQNLRRWS
RQGERNEAPFSLGGSVSGKDDLISVGPDGKGGRIKVLRSKPQFSNPNASSGSVKRFKIGT
KASGTSSQGCLQIEHFFGKPKR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaaaacgcggcggcgagtgctatctgttcaatctgctacgaagatctcaaa
ccggcggcggagaatctgcaatcgatctccgcctgtggccacgtctttcacgagctatgt
ttgcagcagtggttcgagtactgcccgagcacgaacaagcgaaactgtccgatctgcaag
cagaagtgctatctgaaggatcctttccgcctctactttcaatcttccgggaatcaaatc
gaatcgcagaaggttgggggaatcgaggaagatccggtggtgttgagaggagaagtgaag
cggctcgaagggaagttgcagaatctttcttcggctctggaggagcagaagaaggtgaat
gttgaagtctccgatcagttgtatcaatgtaaggagaaactgaaggaggacaaagtaaaa
agggtggaggctctgcaagaagtatcaacgaaccaacgcttgcttaaactaaaatcagag
gaatgtgtgcagcttacttcccagtgcgctcagctacaagacagaactatggctcttgcc
aaggagctcgcatcgcttaaactagtttcggatataagcttggaggaagatgatgtgctg
aagctagcgttgttggggaataacgcaaagacaaaggatacaatagacactcttgtcaag
tccttggttatccgaaacaggagttacaaggagttgctagccaaatgcaatcagctgggc
agaggggaagctcgatcttctgagaaacttgaaaaagctttggaaaagatggataaacta
aagaagcgagtgagggaacttgagatgataactgaagagaatgagaacaaagcaatacgg
gacatgataaaagcttcaaagaattgcagtgacagaaaagtttccaagcctgcaactgaa
agcttggatagaatctctacaccacttggtaagttggagaagaatgatggcttcaccaat
catggatcatgcttaagcggaagagaagactccttttttggcaaacgggagtcggttata
gtggtagatgatgatgttcacgaagctactaccctttctggcatcagacattcagattct
actatggaagatgagaagggtgaggatagtaatgttcaggagagacgtgatgatccggtg
atcaaggacataaagttcaacatcagagaaggctcaacgccatcagactcaccgtgcagc
aatggtgctggaggcagttggttgtcaagtggagaaaatcaaaatctcagaagatggagc
agacaaggagagagaaacgaagctcctttttcactaggaggttctgtctcaggcaaggat
gatttgatctctgttgggcctgatgggaaaggtggaagaatcaaagtgttgagatctaaa
ccccaattctctaaccccaatgcaagctcaggaagtgtgaagagattcaagattggaact
aaagcaagtggtacctcctctcaagggtgtctgcagatcgaacacttttttggaaaaccc
aaacgctaa
DBGET
integrated database retrieval system
