Brassica oleracea (wild cabbage): 106316479
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Entry
106316479 CDS
T04124
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106316479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106316479
Spliceosome [BR:
boe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106316479
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
106316479
NCBI-ProteinID:
XP_013609828
UniProt:
A0A0D3AAA4
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Position
C1:27227091..27229567
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AA seq
486 aa
AA seq
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MATLEDSFLADLDDLSDNEAELDESEGDDAKKDEEDIDMDMADLETLNYDDLDSVSKLQK
SQRYLDIMQKVEEALGKESDGTEKGTVLEDDPEYKLIVDCNQLSVDIENEIAIVHNFIRD
KYRLKFQELESLVNHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTALTTKGSP
LPEDVLQKTLEACDRALELDSARKKVLDFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQVLGHKRKNLAGFSSATSQLRVGYLEQTEIFQSTPPALKSRAGRILAAK
STLAARVDATRGDPSGTNGKALREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRR
LRKMKERYAVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRISSVPSKLKI
NPTIAKKLKERNYAGGATTSGLTSSLAFTPVQGIELCNPQQALGLGSGTQSTYFSESGTF
SKLKKI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgaagattctttcctcgcagaccttgacgacttatctgacaatgaagca
gaactggatgagtctgaaggtgatgatgcaaaaaaggatgaagaagatattgacatggac
atggctgacttagaaacccttaactacgatgatcttgattccgtttctaagctccagaaa
tctcagagatatctagacattatgcagaaagtggaagaggctcttggaaaggaatctgat
ggaacggagaaaggaactgtgctagaagacgatcctgaatacaagctaatcgtggattgc
aaccagctctcagttgacattgagaatgagattgccatcgtccacaacttcatccgtgac
aagtacagactcaagtttcaagagcttgaatctctggtaaaccaccctattgactacgcc
cgcgttgtcaaaaagataggcaatgagactgatttaacactcgttgatcttgaaggcctg
cttccatctgctattatcatggttgtttcagtcactgccttgaccaccaaagggagccca
ctcccagaggatgtcctgcagaagactctagaggcttgtgatcgagctttagagcttgat
tccgcaaggaagaaggttcttgactttgtcgaaagcaagatgggatctatcgcaccgaat
ctctccgctattgttgggagtgctgttgcggccaagctcatggggactgctggaggtttg
tcagcgcttgcgaaaatgcctgcctgtaatgttcaagttcttggtcacaagaggaagaac
cttgccgggttctccagtgcaacgtcacagttacgtgtggggtatctggagcagacggag
attttccaaagcacgcctcccgcgcttaagagtcgcgctggcaggatcttggctgcaaaa
tctactttggcggcgagagttgatgctactagaggagacccgtcgggaacgaatgggaaa
gctttgagggaagagatacgtaagaagattgagaagtggcaagaacctcctcccgcaagg
cagcctaaaccgcttcccgttcctgattccgagcctaaaaaaagaagaggtggtcgccgt
ctaagaaaaatgaaagaaaggtatgcagtgacagacatgaggaagcttgccaacaggatg
gcctttggtacacccgaagagagctctcttggtgatgggttaggtgaaggatatgggatg
cttggccaggctgggagcaacaggctgcgtatatccagtgttcccagcaagctcaagatt
aatcctaccatcgccaaaaagctgaaagaaagaaactatgcaggtggtgccactacctct
ggattgacatcgagtctggcttttactcctgtgcagggaatagagctgtgcaatcctcaa
caggctttagggttaggcagtgggactcaaagcacttacttttcagagtcagggaccttc
tctaagctcaagaagatataa
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