Brassica oleracea (wild cabbage): 106316680
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Entry
106316680 CDS
T04124
Name
(RefSeq) PHD finger protein MALE STERILITY 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106316680
Transcription factors [BR:
boe03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
106316680
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GFIT
Motif
Pfam:
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
106316680
NCBI-ProteinID:
XP_013610019
UniProt:
A0A0D3EAB5
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Position
C9:complement(34107530..34110445)
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AA seq
667 aa
AA seq
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MSNLIRTDLPKKRKRGESTVFRLKTFGETGHPAELNQLSFRDNLGKLLEFGHFESSGLMG
SWSFQLEVHRHPNPLYVLLFVVEEPIEASLNLRCNHCQYVGWGNHMICNKKYHFVIPSKE
TMAAFLKLEGGILVSPEKESLSHLVELQGHVLHGFFHSNGFGHLLSINGIESGSDLTGHQ
VMELWDRLCSGLKARKIGLNDASHKKGMELRLLHGVAKGEPWFGRWGYRFGSGTYGVTQK
IYEKALESVRYVPLCLLNHHLTSLNRETPILLSRYQTLSTEPLITLSDLFMFMLHLHSRL
PRDNYMNNSRNQIISIDSTNCRWSQKRIQMAIKVVIESLKRVECRWISRQEVRDAARNYI
GDTGLLDFVLKSLGNQVVGNYLVRRSLNPVKKVLEYCLEDISNLLPSSNHELTTLQNQYQ
MGKTTTTTNGHNKITRGQVMKDMVYFYKHILMDYKGVLGPIGILNQIGMASRAILDAKYF
IKEYHYIRDTLMKTIQLDGGGKLGIFCTIAWKSHHHNNDIKMPPQECIVVNKNATMSEVY
REAERVFREIYWELRDVVVDNQREMAPWVDEMALNGNKGLVLDGNVGVMMNIEVMKYYDD
EDSKKKDKRIECECGAKEEDGERMVCCDICEVWQHTRCVGVQHNEEVPLIFLCQSCDQHL
IPLSFLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatctgattcgaacagatcttccaaagaagaggaagagaggagaaagtacggtt
tttaggctgaagactttcggagagacaggacatcccgctgagctgaaccagttgtctttt
agagacaaccttgggaagcttcttgagtttggtcactttgagagctccggtctcatggga
agttggtcctttcagctcgaggttcatcgtcacccaaatcctctatatgttcttctcttt
gtcgtcgaagagcccatcgaagcctctcttaacctccgttgcaaccattgccaatatgtt
ggttggggaaaccacatgatatgcaacaagaagtaccatttcgtgatcccctcaaaggaa
acaatggccgcctttctaaaactagaaggaggaatcttggtttctcccgaaaaagaaagc
ctctcccatcttgtggaacttcaaggccatgtccttcacggctttttccactccaacgga
tttggtcacttgctctcaatcaatggcatcgagtccggttccgacttaaccggtcatcaa
gtcatggagttgtgggatcgcctctgctctggtttaaaggccaggaaaatagggttgaac
gatgcatcgcacaagaaagggatggaactgaggctgctgcatggagtagcaaaaggagag
ccgtggttcggtcgttggggttaccggttcgggtcagggacatacggagtgactcaaaag
atttacgagaaggcacttgagtcggtccgctacgtacccttgtgtttgcttaaccatcac
ctaaccagccttaaccgtgagactccaatcctcttgtcaaggtatcaaactttatccacc
gagccattgattactctcagtgatctcttcatgttcatgcttcatctccattcgcgtctt
ccaagagacaactacatgaataactcccgaaaccaaatcatctccattgatagtaccaac
tgtagatggtctcaaaaacggattcaaatggctattaaagtggttatagagtctttgaaa
agggtcgaatgccggtggatatcgagacaagaagtgagggacgcagctagaaattacatc
ggggacacgggtttgcttgacttcgtgttgaagtcgctcggtaaccaagtggtcgggaac
tatttggtccgacgtagtctaaacccggtgaagaaagtgctagagtattgcttggaggac
atatcaaatttattaccaagtagtaaccatgaactcacaacccttcaaaatcaatatcaa
atggggaagactactaccacgacgaacggacataacaagatcacaagaggtcaagtgatg
aaagacatggtatacttttacaaacacattcttatggactacaagggagtgttaggcccc
ataggcatattgaaccaaatcggaatggcttcaagggctatcctcgacgctaagtacttc
atcaaagagtatcactacatcagagatacattgatgaaaacaattcagttagatggaggt
ggcaaattaggaatattctgcacaatcgcgtggaaatctcatcatcataacaacgacata
aagatgcctccacaagaatgcatagtggtgaacaaaaatgcaacaatgagtgaagtgtat
agagaggcagagagagtgttcagagagatctattgggaactaagagacgtcgtggtggat
aatcaaagggagatggctccatgggtcgatgaaatggcattgaatgggaacaaaggattg
gtgttagatgggaatgtaggagtgatgatgaacattgaagtgatgaagtattatgatgat
gaagatagtaagaagaaggataagaggatcgagtgtgaatgtggagcgaaggaggaagat
ggagagaggatggtgtgttgtgatatttgtgaagtatggcaacacacaaggtgtgttggt
gttcaacataacgaggaagttcctctcatttttctttgtcaaagctgtgatcaacatctt
attcctctctcttttttgccttga
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