Brassica oleracea (wild cabbage): 106316685
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Entry
106316685 CDS
T04124
Name
(RefSeq) protein argonaute 9-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106316685
03036 Chromosome and associated proteins [BR:
boe03036
]
106316685
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106316685
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106316685
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106316685
microRNA pathway
RISC loading complex
106316685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
106316685
NCBI-ProteinID:
XP_013610027
UniProt:
A0A0D3EDJ0
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All DBs
Position
C9:complement(44576019..44582286)
Genome browser
AA seq
906 aa
AA seq
DB search
MDSHEAKRLPPPPPVVPPNLVPEREPIKKTTLLPMARRGIGSEGVRTPLLTNHFRVNFNN
ANGHFYRYSVTITYEDGSPMEAKGVFRKILEKVQETYRTDLGSKYFAYDGQKNLFTIGVL
PSNKMDFLVVLENTPSSRNNTGNASPNETNDADRKRSRLPHRSKKFMVEISYAARIPMQA
IASAIRGKETDNLQDATRVLDVILRQNAARQGCLLVRQSFFHSDARNYINIGGGVFGARG
FHTSFKTTQRGLSLNIDTSTTMVVQPGPVIDFLLANQNVNDPKYLDWNKARRALKNLRVK
VVPSNRECKITGLSEERCKDQMFTMNSKNEMGEAQITVYKYFTEIRGLKLRYSGDFPCIN
VGKPNRPNYIPIEHCELVSLQRYTKSLSSFQKASLVENSRQSPPERMASLTNSMRKSNYN
ADLVLQESGVSIGSSFIQVEGRVLPAPRLRIGNGEEFQPRNGRWNFNKKKLVEPVTVTRW
VVVNFSAGCDTDRLISDLIRCGQMKGMKVEPPYKVVFQEDPNYRGAPPNIRVEKMFEQIQ
SELRKEGKPKFILCILAEKKNSLVYGPWKKKNLIEHGIVTQCIAPPKNVRDQYITNVLLK
INAKLGGLNSLLAMELSRAMIPLVTQVPTFIVGMDVSHGSPNQSDIPSIAAVVGSREWPL
ISKYRACVRTQSRKTEMIDNLFKLVPNEKGKLVDEGIFWELLFDFYTSSGKRRPEHIIIF
RDGVSDSQFNQVLNIELDQIMQACKFVEENWEPKFTVIIAQKNHHTKFFQDRGTENVLPG
TIVDSRICHPHNNDFYLCAHAGLIGTTRPTHYHVLYDEIRFSTDDLQELVHSLSYVYQRS
TTAISVVAPICYAHLAAAQMGTVMKSEDMSLSERSSIHDGITRSGEAPVPPMPMLNSYVA
SSMFFC
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggattctcatgaagcaaaacggctaccacctcccccaccggtagttccaccaaacctt
gtgcctgaacgagagcctatcaaaaagaccacccttcttccaatggctcggcgtggcatc
gggtccgaaggagtgaggacacctcttcttaccaatcacttcagagtcaacttcaacaac
gcaaatggccacttctatcgttacagtgttactattacatatgaagatgggagtccaatg
gaggctaaaggtgtttttaggaagattcttgaaaaggttcaggaaacgtatcgaacagat
ttaggatccaaatactttgcttatgatggccagaagaatctgttcaccattggtgttctt
cctagcaacaaaatggatttcttagtcgttcttgaaaacacaccttctagcagaaacaac
actggaaatgctagcccaaatgaaacaaatgatgcggacaggaaaagatcaaggctgcca
caccgatccaagaagttcatggttgagataagctatgctgcaaggatccccatgcaagct
attgcaagcgctattcgaggaaaggaaacagataatcttcaagatgctacaagagtgttg
gatgtcattttgcgtcagaatgcagctaggcaaggttgcctacttgttcgccaatcattt
tttcatagcgatgctcggaactatataaacattggtggaggtgtatttggtgctagaggg
ttccacacaagcttcaaaactactcaaagaggcttatccttgaacatcgacacttcaact
acaatggtagtacaaccaggccctgttattgattttcttcttgcaaatcagaatgtgaat
gacccaaagtatcttgactggaataaggctaggcgtgctctcaaaaatcttagagttaag
gttgtcccctcaaatagagaatgcaagataactggactaagtgaagaacgctgcaaagat
caaatgtttactatgaattctaaaaacgagatgggggaagctcagattaccgtgtacaag
tacttcaccgagattcgcggtctcaaactgcgatattcaggtgactttccttgcatcaat
gttggtaagccaaatcgcccaaattacatccccattgagcactgtgaacttgtgagtcta
cagcgttacacaaaatcgcttagtagttttcagaaggcttctctggtagaaaattctagg
cagagtccacctgaaagaatggcttcactaaccaatagcatgaggaagagcaactataat
gctgaccttgtgttgcaagaaagtggtgtcagcattggctctagcttcatccaagttgag
ggtcgggttttaccagcaccaaggctgagaataggcaatggagaggagtttcaacctcgc
aatgggcgttggaacttcaataaaaagaaacttgttgagccagtcacggttactagatgg
gttgttgtgaacttctctgctggatgtgatacagataggctaatttctgacttgattaga
tgtggacagatgaaaggaatgaaggtagaacctccatacaaagtcgtatttcaagaagat
cctaattataggggtgcaccacccaatatcagagtagaaaagatgtttgagcagatccaa
tctgaactcagaaaagaaggaaagccaaaattcattctttgcattcttgccgaaaagaaa
aactctcttgtttatgggccttggaagaagaagaatcttattgaacatggaattgttact
cagtgtattgctcctccaaaaaacgtaagggatcagtatatcaccaatgttcttctcaag
ataaatgccaagcttggtggactgaactccctgttagctatggaactctcacgagcaatg
atacctttagtaacgcaagttcctactttcattgttgggatggatgtatcccatggttct
cctaaccagtctgacataccatcaattgctgcggttgtgggatccagagaatggccactc
atctcaaaatatagggcatgtgtgcgcacacaatctcggaaaacggaaatgattgataat
ctcttcaaacttgtccccaacgaaaagggaaaactagtagatgaaggaattttctgggag
ctcttgttcgacttttacacaagctcggggaagaggagacctgaacacattatcattttc
agggatggtgtgagtgattcacagttcaatcaagttctcaacattgaattggatcagatt
atgcaggcatgcaagtttgttgaagaaaattgggaaccaaagttcacagtgatcattgcc
cagaagaaccatcacaccaagttcttccaagatagaggcactgaaaatgttcttccagga
acaatagttgacagcaggatctgtcacccacacaacaatgacttctatctctgtgcccat
gctggattgattggaactaccaggccaacacattaccatgtgctttatgatgagattaga
ttttcgacagatgacctccaagaacttgttcattctctatcatatgtctaccagaggagc
accactgccatctctgtcgttgcacctatttgttatgctcatttggcggctgcacagatg
ggaactgtgatgaaatctgaggatatgtctctgtctgagagatcatcgatccatgatggg
atcacgagatctggagaagcccctgtgccacccatgccaatgttgaactcgtatgttgca
agctccatgttcttctgctaa
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