KEGG   Brassica oleracea (wild cabbage): 106317520
Entry
106317520         CDS       T04124                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:boe03016]
    106317520
Enzymes [BR:boe01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     106317520
Transfer RNA biogenesis [BR:boe03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    106317520
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4
Other DBs
NCBI-GeneID: 106317520
NCBI-ProteinID: XP_013610783
UniProt: A0A0D3A0U5
LinkDB
Position
C1:complement(130270..133441)
AA seq 667 aa
MSDVVAEVAAETSVEGNAKPTKQFSVYEATSEELIERSMAPIKKEFLCPPPPSRSLKQSD
VKAPHPSLVQEKKSKRQLKRERREKCAINLCPQVSKTEDVDSCQYKEKCRFNHDIEAFKA
QKPDDIDGQCPFVASGMKCQYGLSCRFFGTHKAISGGNSDGEQKNSEFNFFNKETQRLLW
KNNMTFVKADAKLKSLGLMGHAKKSNAAQENDAEKPLNGANGSQATEDVDVHGPLETEQV
RPMKKAKSDDNNETSKLGDINDGVMDVDDETEKKGHSTSKAKIEDEEDSIKVVETDGSLK
SHPREKKKLIDFRDKLYLAPLTTVGNLPFRRLCKVLGADVTCGEMAMCTNLLQGQASEWA
LLRRHSSEDLFGVQICGSFPDTVSRAVELIDRECTVDFIDINMGCPIDMVVNKSAGSALL
NKPLRMKNIVEVSSSIVETPITIKVRTAFFEGKNRIDSLISDIGDWGATAVTIHGRSRQQ
RYSKSADWDYIYKCTKNASSNLQVIGNGDVYSFLDWNKHKSDCPELSSCMIARGALIKPW
IFTEIKEQRHWDITSGERLNILKDFVRFGLQHWGSDTKGVETTRHFLLEWLSYTFRYIPV
GLLDVIPQQINWRPPSYFGRDDLETLMMSESAGDWVRISELLLGKVPEGFTFAPKHKSNA
YDRAENG
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgtccgatgtagtagctgaggtcgcggcggagacgagtgttgaaggaaatgcaaagccg
acgaagcaattcagtgtgtatgaagcgacttcggaagagcttatagagcgttcgatggct
cctattaaaaaggagttcctatgtcctcctcctccaagccgttccctaaagcaaagtgac
gtgaaggcgcctcatccgagcttagtccaggagaagaaatcgaagcgacagctcaaaagg
gaacgccgggagaagtgtgcgataaacctgtgtccgcaggtttcgaaaacagaagacgtt
gattcgtgtcagtataaagagaaatgccgctttaatcatgacattgaagccttcaaagct
cagaaaccagatgatatagatgggcagtgcccatttgtggcctctgggatgaagtgtcaa
tatggtttatcatgcagattctttggcactcacaaagctatctctggtggaaattctgat
ggggagcagaagaactccgagtttaatttttttaacaaagagacacagaggcttttatgg
aaaaataacatgacctttgtcaaggcagatgccaaacttaaatcccttggccttatggga
catgccaaaaaaagcaatgctgctcaagagaatgacgcagaaaaacctctgaatggtgct
aatggcagtcaagcaactgaagatgttgatgttcatggaccattagaaactgaacaagtt
cgtcccatgaaaaaggccaaatctgacgacaacaacgagacttctaaacttggagacatt
aatgatggggtgatggatgtggacgatgaaacggaaaagaaggggcattctacttcaaaa
gccaagatagaggatgaggaggatagcatcaaagttgttgaaactgatgggagcctaaaa
tcgcaccctcgcgaaaagaaaaagcttattgattttagggataagttgtaccttgcaccc
ctaacaactgtgggcaatcttcccttcagaagactttgcaaagtattgggagctgatgtg
acttgtggtgagatggccatgtgtacaaatcttttgcagggccaagcttcggaatgggct
ctgcttagaaggcattcatcggaagatctgtttggtgttcagatttgcggttcttttcca
gacacggtgtctcgtgcggttgagcttatagatcgagaatgcacggttgatttcatagac
atcaacatgggctgcccgatagatatggttgtgaacaaaagtgctggttcagctcttctc
aacaaaccattacgaatgaagaacatcgtggaggtctcttcttccattgttgaaacacct
atcactatcaaggtacgaactgcattttttgagggtaagaaccggatagactcattaatt
tcagatattggggattggggagccactgcagtgacgattcatgggaggtcaagacaacaa
cgttatagcaagtctgcggattgggactatatatacaagtgtaccaaaaacgcttcctct
aacctacaagttataggaaatggagatgtctactcttttttagactggaacaaacacaag
tctgactgtcctgagttgtctagctgcatgattgctcgcggagcactgatcaagccttgg
atatttactgaaatcaaagagcaacgacactgggatattacctccggggaaagacttaac
atcttaaaggactttgtgcgttttggtcttcaacattggggatccgacacaaaaggagtt
gagacaactaggcatttcttgctggagtggctaagctacacgtttaggtacatacctgta
ggtctgctggatgtgatcccgcagcaaatcaactggcgtccgccttcttactttggtcgt
gatgatctcgagactctcatgatgtctgaatctgcgggtgactgggttcgtatatcggaa
ttgctgcttggaaaggttccggaaggcttcacgtttgcacccaagcacaaatccaacgcg
tatgaccgagctgaaaatggctaa

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