Brassica oleracea (wild cabbage): 106317781 Help Entry 106317781         CDS       T04124                                  Name (RefSeq) ATP-dependent RNA helicase DHX36   KO K14442   ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] Organism boe  Brassica oleracea (wild cabbage) Pathway boe03018   RNA degradation Brite KEGG Orthology (KO) [BR:boe00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     106317781  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:boe03019]     106317781    03012 Translation factors [BR:boe03012]     106317781 Enzymes [BR:boe01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      106317781 Messenger RNA biogenesis [BR:boe03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      106317781 Translation factors [BR:boe03012]  Eukaryotic type   Initiation factors    Initiation associated factors     106317781 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  OB_NTP_bind HA2_C Helicase_C DEAD HA2_N dsrm AAA_22 T2SSE ATPase nSTAND3 AAA_19 AAA_16 PhoH Myosin_head Motif Other DBs NCBI-GeneID:  106317781 NCBI-ProteinID:  XP_013611008 UniProt:  A0A0D3EHR3 LinkDB All DBs Position C9:complement(53057610..53063138) Genome browser AA seq 1155 aa AA seqDB search MRFTKRISFFLWQATKLPTRSLPRNPSLCRSYIVGAPISSGDVVTGLSYGQIRRRFIGYT AEQFSDDEYECEFEEHKASSSVANVDEWKWKLGILLANDSEREIVSRDKRDRRDYEQISN LAKRMGLYSEIYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLLQEHLDRQ QLNSGKANESEADSHPPKQTEELPDESSDAFLDGSVMEKVLQRRSMRMRNMQRAWQESPE GRTMLGFRKSLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAF CNIICTQPRRISAMAVAERVSAERGEPLGETVGFKVRLEGMRGKNTQLLFCTSGILLRRL LSDRNLNGITHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYFG GAPTIHIPGFTHPVKAHFLEDVLEMTGYKLTSFNQVDDYGQEKTWKTQKQLMPRKRKNQI TSLVEEALSKSTFESYSSRTRDSLSSWMPDCVGFNLIEAVLCHICRKERPGAVLVFLTGW DDISSLRDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEAS ITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRLLPGECYHLYPK CVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIAGFLSAALQAPEPLTVQNAIGFLKMI GALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFHCFDPILTIVSGLSVRDPFLLPQEK KDLALSAKLRFSAKDYSDHMALVRAFEGWKNAEREGSAYEYCWRNFLSAQTLQAIHSLRK QFNYILKEAGLVHDDSALNNKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQ VSLYANSVNSRFPTIPYPWLVFGEKVKVNAVLIRDSTGVPDSSLILFGGSLSTGVQVGHL KMLDGYIDFFMDPNLADSYVKLKEELNKLLQKKLEDPSVDIHKEGKYLMLAVQELVAGDQ CEGRFVFGRDTKRASQPQLAGENNKLSKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNE FRALVEFKGMQFVGKPQRNKTLAEKDAAVEALAWLTHTSDNSTDQYSGDADSPPDVTDNM LKLLGGKRRRRSKGK NT seq 3468 nt NT seq  +upstreamnt  +downstreamnt atgcgtttcaccaaacgaataagcttcttcctgtggcaggccaccaagctccccactcgc tctctaccgagaaacccatctttatgcaggtcttatatcgttggtgctccgatctctagt ggcgatgttgtcacgggtttgtcctacggccagatacgtcgtcgtttcatcgggtacact gcggaacagttctctgatgatgagtacgagtgtgaattcgaggaacataaggcttcatct tctgtggccaatgttgatgagtggaaatggaagttagggattctgctggctaatgatagc gaacgagagattgtttctagagacaaaagagaccgaagggattatgagcagatctcaaat cttgccaagagaatgggactctacagtgagatctatggaaaagtggttgttgcaagcaag gttcctcttcccaactacaggccagatttggatgataagcgtccacaacgggaggtggta cttcctttgagtttgcagagaagggtagaggggctactccaggaacaccttgatagacag cagctgaactcaggaaaggctaatgaaagtgaagctgattctcatcctcctaagcagact gaagagcttcctgatgaaagttctgatgcgtttctagatggttctgtaatggagaaggtg cttcagaggaggagtatgcggatgcgcaatatgcagagagcctggcaggaatcacctgag gggcgtacaatgctgggattccgaaaatctttgccttcattcaaggacaaggaaagactt cttcaagctattgctcggaaccaggtaatagtggtatctggggagactgggtgtggtaag acaactcaactgccacagtacattttggaatcggagatagagtctggtcgaggagcgttc tgcaacatcatttgcacacaacctcggaggatatctgccatggcagttgcagaaagagtg tcagctgagagaggagaacctcttggtgaaacggttgggtttaaagttcgtctagaagga atgagagggaagaatactcaacttctgttttgtacaagtggtattctactcagacgactg cttagtgatcgcaatttgaatggcataacacatgttttcgttgatgagattcacgaaagg ggaatgaacgaagatttcttgataatagtgttgaaggagcttcttccacggcgtccggat ctgagattggttctcatgagtgccactttgaatgctgaactcttctctaactattttgga ggagcacctacaattcacattccaggcttcacacatccagtgaaggcacattttctggag gatgtactcgaaatgacgggatataagttgacctctttcaaccaagtagatgattatggc caagaaaagacttggaaaacgcagaagcagttgatgccacgcaaaaggaaaaaccagatc acttctcttgttgaggaagctcttagcaagtcaacttttgaaagctatagctctaggact cgtgattcgctctcgtcttggatgcctgattgcgtaggatttaatcttattgaggccgtt ctctgtcacatatgccgcaaagaacgtccaggagctgtactagtgtttttgacaggatgg gatgatattagctccctgagggaccaaatcaaagcacatcctctcctcggtgatcccaat agggtcttgctgttgatgtgccacggttcaatggcaactgctgaacagagactcattttc gagagagcacctcctaatattcgcaaaattgtacttgctacaaacatggcagaagctagt attacaataaacgatgtagtttttgtggttgactgcggaaaggcaaaagagaccacctat gatgctttgaacaatacaccttgtttgctaccctcatggatatctcaagcttctgctcga cagcgaaggggtagagctggtcgtctgcttccgggagaatgctatcacctgtaccccaaa tgcgtgtatgaagctttttcggagtatcaacttcctgaacttctgaggactcctttaaat tctctctgcctgcaaattaaaagtcttcaggttgaaagcattgcagggttcttgtcagct gcacttcaggctccagaacctttgaccgttcaaaatgctattggattcctgaaaatgatc ggagcactggatgagaaggaaaatctgacggatcttgggaaactcttgtcgattctccca gttgatcccaagctggggaaaatgctcataatgggtgccatcttccactgctttgatcct atcctgacaattgtatcagggctcagtgtcagagatcctttccttctacctcaagaaaaa aaggacttagctttatcagccaagttgagattctcagcgaaagactacagtgaccatatg gcactcgttcgcgccttcgaagggtggaaaaacgctgaaagagaaggatcggcttacgag tactgttggaggaactttctatcagctcagacgcttcaggcgatacattctctgaggaag cagttcaactatatcctgaaagaagctggcttagtacacgatgactcagctctcaacaac aagctaagtcacaatcagtctcttgttcgcgctgtcatttgctctggcttattccccggg atagcatctgttgtgcacagagagacttccatgtcgttcaagacgatggatgatggccaa gtatcactatacgcgaactctgttaattcgaggttcccgacgattccatacccttggcta gtctttggagagaaagtaaaagtcaatgcagtgctcataagagactccacaggtgtccct gattccagtttgatcctttttggtggttcactgagcaccggagtacaggtgggacatcta aaaatgcttgacgggtacattgacttcttcatggatccaaatttggcagactcctacgtg aagctgaaggaagaactcaacaagcttcttcagaagaagcttgaagatccaagcgtggac atccacaaagaaggcaagtacctgatgcttgcagtccaagagctcgtagctggagaccaa tgcgaagggagattcgtattcggccgtgacacaaagagggcaagccaaccgcaattagca ggagagaacaacaaactctccaaagacgggacaaacccgaagagtctccttcagacgctt ttaatgagagctggacactcgcctccaaagtacaagaccaaacatctgaagacaaacgag tttagagcgcttgtggagtttaaagggatgcagttcgttgggaagcctcagaggaacaaa acgctcgctgagaaagatgcagctgttgaggccttggcttggttgactcatacctctgat aatagtactgaccagtacagtggagacgcggattctccacctgatgttactgataacatg cttaaactccttggtggaaaacggcgcaggcggtccaaaggcaagtag

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