Brassica oleracea (wild cabbage): 106317784
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Entry
106317784 CDS
T04124
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106317784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106317784
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106317784
Membrane trafficking [BR:
boe04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
106317784
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106317784
Exosomal proteins of colorectal cancer cells
106317784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
106317784
NCBI-ProteinID:
XP_013611014
UniProt:
A0A0D3EHR0
LinkDB
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Position
C9:53051687..53053710
Genome browser
AA seq
440 aa
AA seq
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MASESRIGSDGLFNAAEVTTSGRPVLRRNEVECFLLSSVDLDSEDDPPRFASLRSGNLIL
TTHRLIWIPSSQPNASLPSSLPLSSITHIFSHKKSIKSMFHSPRIRFQVDSVVVVTVVFR
GKGDFDGFLAKLWECWRGRAWEEDEKSESEASSGSGAGTVAQGLYGNDGTVRMVGLAGIL
RKEQEQWESTDKSLQDAFQDLNALMSKAKEMVSLAEKMRQKLLSAPSSQNGGGDDEEMGS
KEEMQQWMLSVGIISPVTKESAGALYHQELSRQLADFVRIPLEQAGGMISLTDMYYHFNR
ARGTELISPDDLWQACNLWEKFDVPVMLRKFDSGVKVIQNKSHSDEEVMSRIRTLVTKTE
TLRTGVTASDAALTLKIAPAMAKEHLLSAETKGLLSRDMSPDGLRFYFNLFPEIDPTDLH
LVKGFGTYGEWVKATSLLSV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgaaagcagaatcggatccgatggtttgtttaacgccgcggaggtgacgaca
agcggcagaccggtgctccgccgcaacgaagtcgagtgcttcctcctatcctccgtcgac
ctagactccgaagacgatcctcctcgattcgcctccttgcgctccggaaacctaatctta
accactcaccgtctcatatggatcccttcttctcagccaaacgcctctcttccttcctcc
ctccctctctcctccatcactcacatcttctcccacaagaagtcaatcaagtccatgttc
cactcgcctcggatccggttccaagtggactccgtcgtcgttgtgaccgtcgtcttcagg
gggaaaggggatttcgacgggttcttggccaagctctgggagtgctggaggggcagagct
tgggaggaagatgagaagagcgagagtgaggcttcttcggggtcaggagctggaactgtt
gcgcagggtttatacggaaacgatggaacggtgaggatggtggggttagctgggatactg
aggaaagagcaggagcagtgggagagtactgataagagcttgcaggatgcttttcaggat
ttgaatgctcttatgagtaaggctaaggagatggtgagtctggcggagaagatgcggcag
aagcttttgtctgctcctagtagtcagaacggaggaggtgatgatgaggagatggggtct
aaagaagagatgcagcaatggatgttgagcgttggtattatctctccggttactaaggaa
tctgctggggcgttgtaccatcaagagttgtctcgccagttggcagattttgtgagaatc
ccattagaacaagctggagggatgatcagccttactgatatgtattaccacttcaatcgt
gctaggggaacagagttgatctctccagacgatttgtggcaagcttgtaacctctgggag
aaatttgatgttccagtaatgctacggaagtttgatagcggtgtgaaggtcatccagaac
aagtcccatagtgacgaggaggttatgagtagaatcagaacgcttgtgactaaaaccgaa
actctaagaaccggagtcactgctagtgatgcagctttgacactgaaaatcgctccagcc
atggccaaggaacatctactatctgcagagaccaaaggtctgctgagtagagacatgagc
cctgacgggcttcgattctacttcaacctgtttccagagattgatccaactgatctccat
ttggtcaagggctttgggacatacggtgaatgggtcaaagcgactagtttgttgtccgta
tga
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