KEGG   Brassica oleracea (wild cabbage): 106317849
Entry
106317849         CDS       T04124                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106317849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:boe03009]
    106317849
Ribosome biogenesis [BR:boe03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    106317849
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Utp13 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_Nup120_160 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_HPS5 WD40_like Beta-prop_Vps41 PROPPIN Ge1_WD40 Nbas_N Beta-prop_RIG_1st Beta-prop_NOL10_N Cytochrom_D1
Other DBs
NCBI-GeneID: 106317849
NCBI-ProteinID: XP_013611087
UniProt: A0A0D3EEY3
LinkDB
Position
C9:47736463..47741223
AA seq 879 aa
MAPQSLKKNYKCSRSLKQFYSGGPFIVSSDGSFIACACGDAINIVDALDSSVKSTIEGES
DTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRTWKGHEGPVMGMAVHASGGLLATA
GSDRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDADKNILISGSDDATVRVWDLLAKNT
EKKCLAILDKHFSAVTSIALSEDGWTLLTAGRDKVVNVWDLHDYSCKTTVATYEVLEAVT
PVSSGTPFASFVASLDKKTKKKKTLSQETHFITLGERGVVRIWKSEGSVCLYEQKSSDIT
VSSDDEESKRGFTAAAMLPSDRGLLCVTADQQFFTYSVVENAEESELVLSKRLVGYNEEI
SDMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVT
GSKDKTVRLWNATSQSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGVSE
DSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHK
RRIFSVEFSPVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSC
GADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMVATGGGDAVINLWHDSTASDKE
DEFRKEEETILRGQELENAVLDAEYTKAIRLAFELRRPHKVYELFAGLCKKRESDDQIVK
ALQGLEKEEFRLLFEYLREWNTKPNRCHIAQFVLYQTFNILPPTEIVQVKGIGELLEGLI
PYSQRHFNRMDRFVRSSFLLDYTLGEMSVIDPETETETEYRKDKKMEEVKVIASVSAMEQ
DSEGIDQKTPSRKRKSQKSKDKSNKKRLVAEAQGNVITV
NT seq 2640 nt   +upstreamnt  +downstreamnt
atggctcctcagtcgttgaagaagaactacaagtgctctcgttctctaaagcagttctac
agcggcggtcctttcatcgtttcgtctgacggttcttttatcgcctgtgcttgtggtgat
gcgattaacatcgtcgacgcgttggactcgtcggtgaaatcgacaatcgaaggcgagtcg
gatacgctcactgccttggctcttagtcctgacgataagctgctattctccgctgggcat
agtagacagattcgagtttgggatttggaaacgttgaaatgcattcgcacttggaaggga
cacgaggggcctgtgatgggaatggctgtccacgcatctggtggattgttagctacagct
ggatctgataggaaagtgcttgtttgggatgttgatggtggtttctgcactcattatttc
aaaggtcataaaggagttgtttcaagtatcttgttccatcctgatgctgacaaaaacatt
cttatatcgggaagtgatgatgctactgttcgtgtctgggatcttttggcgaagaatact
gagaagaaatgtcttgccattttggataagcacttttcagctgtgacttccattgctctg
tcagaggatggatggactttactcactgctggaagagataaagttgtgaatgtgtgggac
cttcatgattatagctgcaagactacagttgcaacatatgaggtactagaagctgtgaca
ccagtttcttctggaacacctttcgcttcatttgtagcttctcttgataagaagactaag
aagaagaaaactctttctcaagaaacgcactttattactctcggggaacgtggtgtggtg
cgcatttggaagtctgaaggttcagtttgcctctacgagcagaagtcgtcggatatcact
gtcagctcggatgatgaggaatctaaaagagggttcactgcagctgctatgttgccttct
gatcgtggactgctttgtgtgactgctgatcagcagttttttacctactccgttgtggaa
aatgcagaagaatcagaattagtgctaagcaagaggcttgttggatataacgaagaaata
tctgatatgaagttcctaggtgatgaagaacagttcctcgcagtagctacaaatctcgag
gaggttcgtgtttatgatgtagcaacgatgtcatgttcgtacgttttagctggccataaa
gaagttgttctgtctcttgacacatgcgtatctagttctgggaatgtgctgatcgtgacc
ggaagtaaagacaaaactgtaaggctatggaatgcaaccagccaatcttgcattggagtt
ggtacaggtcataacggcgatatcttagcggttgcttttgcgaagaaatctttcagtttc
tttgtcagtggcagtggtgatcgtacactgaaggtttggagccttgatggggtctcagag
gactcggaagagcccattaatctgaaaactagaagtgttgttgctgcccacgataaagac
atcaattctgtggctgttgctcgtaatgatagcttggtttgcactggctctgaggatcgg
acagctagcatatggaggctaccagacttggtgcatgttgttacacttaaaggacataag
aggcggatattttctgttgagttctcacctgttgatcaatgcgtaatgacagcatcaggt
gataaaacagtaaaaatttgggcaatatctgacggttcatgcctcaaaacattcgaaggt
cacacctcaagtgtccttagagcctcattcataactgacggcacccaatttgtctcatgt
ggtgccgatggtttattgaaactttggaatgtgaacactagcgaatgcattgccacatat
gaccagcacgaggataaggtgtgggctttagctgttggaaagaaaacagaaatggttgca
accggtggaggcgatgcagttattaatttatggcatgattccaccgcttctgataaagaa
gatgaattccggaaagaggaagaaacaatcttgagaggtcaagagctggaaaacgcagtg
ttagacgccgaatacactaaagccataagattagcatttgagcttcgtaggcctcacaaa
gtttacgaactctttgctggcctctgcaagaaaagagaatcagacgaccagattgtgaaa
gctcttcaaggacttgaaaaagaagagttccgtttactttttgaatatctcagagaatgg
aacacaaaaccaaaccgatgccacattgctcagtttgttctttaccaaaccttcaacata
cttcctcccacagaaatcgttcaggtaaagggaattggagaactcctggaaggtctaatc
ccatattctcagagacatttcaataggatggacagatttgtaagaagcagtttcttgtta
gactacacactcggtgagatgtctgtgattgatccagagacagagactgagactgagtat
cgcaaggacaagaagatggaagaagtaaaggtcatcgcttctgtgtctgcaatggaacaa
gactcggaaggaatagaccagaagacaccttcgaggaaacgaaagtctcagaaatcaaaa
gataaatcgaacaagaagagactcgttgcggaagctcagggaaatgtaatcacagtttga

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