Brassica oleracea (wild cabbage): 106318098
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Entry
106318098 CDS
T04124
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106318098
09122 Translation
03015 mRNA surveillance pathway
106318098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106318098
Spliceosome [BR:
boe03041
]
Complex A
Other components
Complex A specific factors
106318098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
106318098
NCBI-ProteinID:
XP_013611403
UniProt:
A0A0D3ECE7
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Position
C9:complement(41419870..41423185)
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AA seq
416 aa
AA seq
DB search
MSGTYNQGGGGGGAPIPSYGGDGYGGGGGYGGRSSSGGGGYGGRGGYGGGGGRGNQGGGG
GYGDRGGRGGGGGGRGGGGRDGGGRDGDWRCPNPSCGNVNFARRVECNKCGAPAPSGTGD
RGGGRGASDRGGGGRDSGRSYESSRYDGGSRSGGGGGSYGSDSQHRGNGSYGQGPPPPLA
AIPSYDGSGSYPPPPMGYGMEAVPPPSSYAGGPPSYGGPTGGYGGDAPSTGGRGGRGGGY
DGGSAPRRQEPSYEDAPAEKVKQCDENCDETCDNARIYINNLPPDVTTDELKDLFGGIGQ
VGRIKQKRGYKDQWPYNIKIYTDEKGKNKGDACLAYEDPSAAHSAGGFFNNYEMRGNKIS
VTMAEKSAPKAPAFDQRGGGRGGGGGYGGGGGDRRRDNYGSGPDRNHHGGNRSRPY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggacgtacaatcaaggcggcggcggcggtggtgcgcctattccgtcgtacggc
ggtgatggatacggaggaggtggaggttatggaggtcgcagttcctctggcggaggtgga
tacggcggacgcggtggttacggtggcggcggcggtagaggaaatcaaggcggtggtggt
ggatatggtgatcgcggtggaagaggaggtggcggcggtgggagaggtggtggtggtaga
gacggtggcggcagagatggtgattggcgttgccctaacccaagttgtgggaacgtgaac
tttgcaaggagagttgaatgtaacaagtgtggtgcacctgctccttctggcaccggtgac
cgaggaggtggccgaggtgccagtgatcgtggtggtggtggtcgtgacagtggtaggagc
tacgagagtagtagatatgatggtggcagtaggagcggtggtggtggtggctcttacggt
agtgatagtcagcataggggtaatggttcttacggtcagggtcctccacctcctttggcg
gctattccatcctatgatggttcgggcagttaccctcctccacccatggggtatggaatg
gaagcagttcccccgccttcaagctatgctggtggtccaccttcgtatggtggtcccaca
gggggttatggcggtgatgcaccgagcactggtggtcggggtggtagaggtggtggctac
gatggtggtagtgctcctcgacgccaggaacctagttatgaagatgcacctgctgaaaaa
gtcaagcagtgcgacgagaattgtgatgaaacttgtgataatgccagaatatatatcaat
aatttacctccggatgtgacaaccgatgaactcaaggatctctttggtggcattggacaa
gttggaagaatcaagcagaagcggggttacaaagatcagtggccatataacatcaagatt
tacactgatgagaagggaaagaacaaaggtgacgcctgcctggcttatgaagatcctagc
gcagcacactcagcaggcggctttttcaacaattatgaaatgagggggaacaagattagt
gtaacgatggcagagaagtctgcgcctaaagctcctgcttttgaccagagaggcggtggt
agaggaggaggaggtggctatggtggaggtgggggagacagaagaagagataactatggt
tcaggaccagacagaaaccaccatggaggaaaccgttctcgtccgtattga
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