Brassica oleracea (wild cabbage): 106318527
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Entry
106318527 CDS
T04124
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106318527
04120 Ubiquitin mediated proteolysis
106318527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106318527
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106318527
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
U-box type E3
106318527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
106318527
NCBI-ProteinID:
XP_013611998
UniProt:
A0A0D3EFB4
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All DBs
Position
C9:48541553..48547072
Genome browser
AA seq
1040 aa
AA seq
DB search
MSTSKPQRSPSEIEDIILRKILYVTLAESATDASDPRVVYLEMTAAEILSEGKPLLLSRD
LMERVLIDRLSGNNNFPSSSAAEPPFPYLIGCYRRAYDESKKIQSMKDKNLRSEMETVTR
DARRLAVSYCRIHLANPELFGGSDDARKAKKRRNVSPLLPLIFSEVGSGSLDMFGGGGGS
SGGVQCPPGFLDEFFKDSDFDNLDLILKELYEDLRSSVINVSVLGDFQPPLRALKYLVSL
PVGAKSLVSHEWWVPRGAYMNGRAMELTSILGPFFHISALPDNTLFKSQPDVGQQCFSGA
SERRPADLLSSFSTIKNFMNILYSGLHDVLMILLKSTDTRECVLQFLSEVINANASRAHI
QVDPVSCASSGMFCNLSAVMLRLCEPFLDPHFTKRDKIDPKYAFAGHRLKLSDLTALHAS
SEEVSEWIDKGNTAKANDAGNGNESRLLQSKEATSSSSSSQQNAKSTTKYTFICECFFMT
ARVLNLGLLKALSDFKHLSQDISRGEDNLATLKAMRDQAPSPQLELDITRMEKELELYSQ
EKLCHEAQILRDGDFIQRAISFYRLVIVWLVGLVGGFKMPLPSTCPMEFSCMPEHFVEDA
MELLIFASRIPKALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRSSGSS
ATSTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHR
NAWRRIAKEEEKGVYLNFLNFLVNDSIFLLDESLNKILEIKQIEAEMSNTAEWEQRPAQE
RQDRTRLFHSQENIVRIDMKLANEDVTMLAFTSEEITAPFLLPEMVERVANMLNYFLLQL
VGPQRKSLSLKDPEKYEFRPRQLLKQIVRIYVNLARGDSENIFPSAISSDGRSYNEQLFD
AGADVLRRIGEDGRIIQEFMELGTKAKAAASEAMDAEAALGEIPDEFLDPIQCTLMRDPV
ILPSSKNTVDRAIIQRHLLSDNHDPFNRAHLTSDMLIPDIELKARIDEFVRTHQSKKRSS
GEDSSNKERIQTTSSDMLID
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgagcaagccccaaagatctccatccgaaatcgaggacataatcctccgcaag
atcctctacgtaaccctagccgaatccgccaccgatgcctccgatcctcgagtcgtctac
ttggagatgacagccgccgagattctcagcgaaggcaaacccctcctcctctcccgcgat
ctgatggagagagtcctcatcgatcgcctctccggcaacaacaacttcccctcctcctcc
gccgcggagccgcctttcccgtacctaatcggctgctaccgccgcgcgtacgacgagtcc
aagaagatccagtcgatgaaggacaagaatctgaggtcggagatggagaccgtcaccagg
gacgcgaggaggctcgcggtttcgtactgcaggattcacctggcgaatccggagttgttt
gggggatcggatgatgccaggaaggcgaagaagaggaggaacgtgtctcctctgcttccg
ttgatcttctccgaggttggttctggctcgttggatatgtttggtggtggtggtgggagt
agtgggggtgttcagtgtcctcctggttttttggatgagtttttcaaggactcggacttt
gataacttggatttgattctcaaggagttgtatgaggatttgaggtcttcggttattaat
gtgtctgtgcttggagatttccagccgccgttgagggcgcttaagtatcttgttagcttg
cctgttggagctaagtctctggttagtcatgagtggtgggttccgcgtggggcttatatg
aacggtcgagctatggagttgacgagcattctcggccctttcttccatattagcgcattg
cctgataacactctcttcaagagtcaacctgatgttgggcagcagtgtttctctggagca
tcggaacgtcgtcctgcagatttgttatcatccttctctacaatcaaaaactttatgaac
attttgtacagtgggctgcatgatgtactgatgattttacttaaaagcaccgatacacgt
gagtgtgttctacagtttctttcggaagtgatcaatgcaaatgcgtcgagagcccatata
caggttgatccagtttcttgtgctagctcaggcatgttttgtaacctcagcgcagtcatg
ctccggctctgtgaaccatttttggacccgcattttactaaaagggataagatcgatcca
aaatatgcattcgctgggcatcgcttaaaattaagcgacttgactgctctccatgcatca
tccgaggaagtttctgagtggattgacaagggtaatacggcaaaagcaaatgacgctgga
aacggaaatgaaagtcgcttgttacaatccaaagaagccacaagttcaagtagttcttct
cagcagaatgcaaagtcaacaactaaatacactttcatttgtgaatgcttctttatgact
gcaagggtcctcaatttgggtctcttaaaagcactctcggactttaaacatctttctcag
gacatctcgagaggtgaagacaatcttgcaacattaaaagccatgagagatcaagcaccg
tctccacagttggagcttgacataaccagaatggagaaagaattagagttgtattctcag
gaaaagctttgccacgaagctcaaatattaagggatggagactttatccaacgagctatc
tctttctatcgattagtcattgtttggttagttggacttgttggtggctttaagatgcct
ttaccttcaacttgccccatggaattctcctgtatgccggagcattttgttgaagatgcg
atggagttactgatatttgcttcaagaatccccaaggctttggatggagtgctgctggac
gactttatgaacttcataataatgttcatggcaagtccagaatatattagaaacccgtat
ctcagagcaaagatggttgaagttctgaactgctggatgccacgttcaagtggttcttct
gctacatctactctctttgaaggccatcagttatcccttgagtatcttgtcaggaattta
ctgaaactatatgttgacattgagttcacgggttctcacactcagttctatgacaagttc
aacattcgccacaacattgccgagcttctagagtatctctggcaggtgcctagtcaccga
aatgcgtggagacggattgcaaaagaggaagagaagggcgtgtacttgaacttcttaaac
ttcttagtcaatgatagcatctttcttctggatgaaagtcttaacaaaattctcgagatt
aaacaaatcgaggcagagatgtcaaatactgcagagtgggagcagagaccagcgcaagag
agacaggatagaacgagactcttccactctcaggagaatattgttagaattgacatgaag
ctggctaatgaggatgtgactatgcttgcatttacatctgaggagatcaccgccccattt
ctactccctgagatggttgagagggttgcgaatatgcttaattacttcttgttacaactg
gtgggtccacagcgtaagtctttaagcttgaaagatcctgagaagtacgagttccgtcca
agacagttgcttaaacagattgttcgtatatatgtcaatctcgcaagaggagactcagaa
aacatatttcccagtgccatatccagtgatggacgatcatataacgaacagctattcgac
gcaggagcagatgttcttaggagaataggcgaagatggaagaatcattcaagagtttatg
gagttgggcacaaaggccaaagctgctgcttctgaagctatggatgctgaagctgcactt
ggtgaaataccagacgagttcctcgacccaattcagtgcacgctaatgagagatccagtg
atactcccaagctcaaaaaacacagttgatcgagccatcattcaacgtcatcttcttagc
gacaatcacgacccgtttaaccgggcacatttgacatcggatatgttaataccggacatc
gaattgaaagcgagaatcgatgagtttgtgaggacgcatcagtctaagaaacgatcgagt
ggagaagatagcagcaacaaggagaggatacagactacaagcagtgatatgttaatcgat
taa
DBGET
integrated database retrieval system
