Brassica oleracea (wild cabbage): 106318561
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Entry
106318561 CDS
T04124
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106318561
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106318561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
106318561
NCBI-ProteinID:
XP_013612039
UniProt:
A0A0D3EF30
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All DBs
Position
C9:complement(48007981..48014610)
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AA seq
1032 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL
LGVVRIYSKKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSTREQITLQDTMDGVVFSTSQFGLDERFGDGDTAQTALELDEEV
FQDKDLLGSDDEAVQGNDHNAYPDAATPEIKDEMVDVSDAMPRDFNQEQVEDLVAGDEFM
EDAQAPQTPGLVEVPNLSSVRDQLACDDHMEVEDPNAEEVRKASGEPDANEPSEYPAGES
AVAPMDVDKSLINETIDAQNEPQEERTEHVHVTSPCVSHITNEMENPGQVITESGTNVIT
DKSDAVPSVESPGEPTMSNAEHCLTQELKDPGEENQDHFAITTEVNQETDSSLQVDEQLN
NAQATDEGLGDLTGSADTDLPAPEKVLAAPNGLGDENGCMVELESTPDKEDTGTCNGDAG
NNNITGKKRTFTESTLTAESLNSVESVGLIQSKRTANSVPDDDDLLSSILVGKSSFLKMR
STPVLEVATTKRLKSAPRSTTTKRKVLMDDPMVLHGDLIREQLTNTEGIRRVRKKAPCTI
PEILMLQRQALEEDGLFKEPIFTGMSVELVSLHNEPYDLRGITVIKDDDGHASVVGVVEG
NECSVRAVEEKEAEERSAPPQTQPNDSEEQPAEAHTQPQDQQIVDQDEKKDNEPGENICD
LEVLKESGVVNEEISGMPSEDKIDRVEDLQVEGVHENHDEGLGGEDVCDVIEIAEGDVDN
NATLNETDLKVEDEVPHEDKKTDDASSAEVIETGIDDQTPCDNTIVEEAGGSSNLASEKG
CKEPLVEANNDGVVPEIESDNRYKEMFTEEGYMQSALDAEHTSRDGLMGDNDEMDTMEVA
HDTYLMLQEMDTMEVAHDTGFLNVDDDEVDEDHEDDGMEEGDEARLLENSGWSSRTRAVA
KYLQTIFDKEAENGKNVIVADKLLAGKTRKEASRMFFETLVLKTRDYVQVEQAKPYESII
IKPRPKLTKSIF
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcgcagtttatattagcaaagaaaggaccacttgggacgatatggatcgcg
gcccatttggagaggaagcttcgtaagaatcaggtcgctgatactgacattggagtctcc
gttgattctattctctttccggaagctccaattgctctgcgactgtctagtcatctcctc
cttggtgtggttcgtatttattccaaaaaggtcaattacctctttgatgattgcagcgag
gcactgcttaaggtcaagcaagcttttcgctctgctgcggttgacctaccccctgaagaa
tccacagcgccgtaccactctattacgttgcctgagacatttgatcttgatgattttgag
ctccctgacaacgagatctttcagggtaattacgttgaccatcatgttagcacaagagag
caaatcacccttcaggataccatggatggtgttgtattctcaacatctcaatttgggtta
gacgaacgatttggtgatggcgacactgctcaaactgctttggagctcgacgaggaagta
ttccaggataaggatcttcttggatccgatgatgaggcagttcaaggcaatgatcacaat
gcatatccggatgcggcaacaccagagataaaggatgaaatggtagatgtttctgatgca
atgcccagagatttcaatcaagagcaggttgaagatcttgtagctggtgatgagttcatg
gaagatgctcaagctcctcaaacccctggactagttgaggtgccaaacttgtctagtgtc
agagatcagctggcatgcgatgatcacatggaggtagaggatccgaacgcagaagaagtt
aggaaggcctctggagagccggatgctaatgagccctctgaatatcctgccggagaatca
gcagttgctcccatggatgtggataagtcgttgataaatgaaactatcgacgcacaaaac
gagccacaggaggagaggacagagcatgtgcatgttacatcgccatgtgtttctcacatc
accaatgaaatggagaatcctggtcaagtaatcactgagtcaggaaccaatgtcataaca
gataagtcagatgctgttccttcagttgagtcccctggagagcctacgatgagtaatgct
gagcattgtttaactcaagaactaaaagatcctggagaagagaaccaagatcattttgcc
attaccactgaggtcaatcaggaaacagattctagtttacaagtagatgagcagctgaac
aacgcacaggcaactgatgaagggttgggagatctgactggatcggctgatactgatttg
cctgcacctgagaaggtattagctgcacctaacggtctgggggacgaaaatggttgtatg
gttgaacttgaatcaacaccagataaagaagacactggcacatgtaacggggacgcagga
aataataacattactgggaagaaacgcacttttacagagagcacactaactgcagagagt
ttgaactctgttgagtcagttggattgattcagtccaagagaactgcaaattctgttcct
gatgacgatgacttgttgtcttctatcttagttggaaagtcatcttttctgaagatgagg
tctacacctgtgcttgaagtagcaactacaaaacggttaaagtctgctcctcgttctact
accacaaagaggaaggttctaatggatgaccctatggtcttgcatggcgaccttatacgg
gaacagctgacaaacacggaaggtatacgccgtgtgcgtaagaaggcaccttgcaccatc
cctgaaatcttgatgcttcaaagacaggctttggaggaggatgggctttttaaggagcca
atattcactggtatgtcagtggaattagtatctctgcacaatgagccgtatgatctaaga
ggaatcacagtaatcaaggacgatgacggacatgcttctgttgttggagtggtggaaggt
aatgaatgctcagttagggctgtggaagaaaaagaagctgaggaaaggtctgctcctcct
caaactcagccaaatgattctgaggagcaacctgctgaggctcatactcagccacaggat
caacagatcgtagaccaagatgaaaagaaagataacgagcctggtgaaaatatatgtgac
ttggaagttctaaaggaaagcggtgtagtgaatgaagagatcagtggaatgccatctgag
gataaaatcgatcgtgtagaggatttacaggtggaaggagtccatgaaaaccatgatgaa
ggcttaggcggtgaagatgtttgtgatgttatagaaattgctgaaggtgatgtagataac
aacgccactctcaatgagacagacctgaaagttgaggacgaagtaccacatgaagataag
aagacggatgatgcctcctcggctgaagttattgagactgggatagacgaccagactcca
tgcgataacacaattgtagaagaagctggtggttctagtaatctagcttcggaaaaaggt
tgcaaggaacctcttgtggaagcaaataatgatggagtggttccagagatagagtctgat
aacagatataaggagatgtttactgaggagggttatatgcaaagtgcattagatgcagaa
catacttctcgcgatggtcttatgggagataatgatgaaatggataccatggaagttgca
catgacacatatcttatgttgcaggaaatggataccatggaagttgcacatgacacagga
ttcttgaacgtggatgatgatgaagtagatgaagatcacgaggacgatggtatggaagag
ggtgatgaagctcgtcttctagagaacagtggatggtcttctcgtaccagggctgtggcg
aagtatcttcagacgatatttgataaagaagctgagaatgggaagaatgttattgtagca
gacaaactcttagctgggaaaacccgtaaagaagcatcgagaatgtttttcgaaaccctg
gttttgaaaacaagagattacgtccaagttgagcaagccaagccttatgaaagcatcatc
ataaaaccgcgaccaaaactcaccaaatccatcttctaa
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