Brassica oleracea (wild cabbage): 106318570
Help
Entry
106318570 CDS
T04124
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106318570
Membrane trafficking [BR:
boe04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
106318570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_2
Motif
Other DBs
NCBI-GeneID:
106318570
NCBI-ProteinID:
XP_013612054
UniProt:
A0A0D3EB02
LinkDB
All DBs
Position
C9:complement(37097853..37105376)
Genome browser
AA seq
1258 aa
AA seq
DB search
MANYLAQFQTVKNSCDRVVAAVEDVSDLWPTVKGLFEEHQPLKRAFLTNRTRNPVLVENL
PVEFILTTDARLRSRSPQEQYLFWFREPYATIVLVTCEDLDEFKNILKPRLKLIVQNDER
EWFIVFVSKVHPSNDQATKSVKKVYAKLEVDFSSKKRERCCKLDIYGPNAHFWEDLELKI
TECIRNTLDRRVLFYEDEIRKLTEQRFMPIWNFCNFFILKESLAFIFEMAHLHEDALREY
DELELCYLETVNMPGKQREFGGFDSEDDQATLLKPGSKPLTQIVQDDSFREFDFRQYLFA
CQSRLLFKLNRPSEVSSRGYSFVISFAKALTLHESVLPFCLREVWVITACLALLDATASH
HHDGIVAPDIEKEFYRLQGDLYSLARVKFMRLGYLIGYGTDIEKSPLNSACLSMLPWPKP
AVWPSLPPDASSEVLEKEKTILQATSRTKHFGIQRKPLPLEPSVLLRVANRRRASLSTGN
IPEIFDGRTGFTEGSGLEASPRTPSSLKVQAPPMSRTNSSPGNFESPLDRPMRLAEIFVA
AEHALRLTISDHDLSKALSSTQDFEHKYLNLTKGAAENYHRSWWKRHGVVLDGEIAAVCF
KHGKYDLAANSYEKVCALYAGERWQDLLAEVLPNLAECQKNLNDHAGYMSSCVRLLSLDK
GLFAPKERQAFQIEVVNLAHSEMENPVPLDVSSLITFSGSTGPPLQLCDGDPGTLLVTVW
SGFPDDITLDSLSLTLVATNNTDEGGQALKSSAATVLKPGRNTITFDLPPQKPGSYVLGV
VTGQIGRLRFRSHSFSKGGPADTDDFMSYEKPTRPILKVSKPRALVDLASAVSSALLINE
AQWIGIIVHPINYSLKGAILHIDTGPGLKIEDSYGIEMERYVEKDCDAGASKAEVSVEDS
PVSPKQDSEVLNLCDGKIVFSEWASNVSSILWVPVRALSEKLARGSSSVTPLKQDILEGM
RTVALKLEFGMHHNQIFERTVAAHFTDPFDVTTRVVNKCNDGTMVLQVMLHSLVKANLIV
LDAWLDLQEGFVHGKSEGRPTSTFFPLVVSPGSRAAVVFSISLEKTMSSGKDLQLPESIL
NIKYEINGDRAAGAHKPVDADHSGSDSERRALVFKSAIVLQRPVLDPCLTVGFLPLPSDG
LRVGKLITIQWRVERLKELKGSEAVEQQHDEVLYEINANSENWMIAGRKRGHVSLSEEKG
SRVVISILCVPLVAGYVRPPQLSLPNVEEENVRSNPPGPHLVCVLPPLLSSSYCVPVK
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactatttggctcagttccagacggttaagaattcctgcgatcgcgtcgtcgcc
gccgtcgaagatgtgagtgatctgtggcccacggttaaaggtttgtttgaagaacatcag
ccgttaaaaagagccttcttgacaaacaggactcgtaatcccgtgctcgttgagaacttg
cccgttgagtttatattaactacagacgccagacttcggagtcgatctccgcaggaacag
tatttgttctggttccgagaaccatatgcaactatagttcttgtgacctgcgaggatctt
gatgagtttaaaaacattcttaagccacgtctgaaattaattgttcagaacgatgagagg
gaatggtttattgtatttgtatctaaggttcacccaagtaatgaccaagcaactaaatct
gtcaagaaagtatatgccaagcttgaagttgatttcagttctaaaaagagagaaaggtgc
tgtaagctggatatatatggccccaatgcacatttttgggaggatctagaattaaagatt
accgagtgcatcaggaataccttggataggcgcgttctattctacgaggatgagatacgc
aagctcaccgagcagcggtttatgccaatatggaacttttgtaacttcttcatcctgaag
gagagtttggcttttatatttgagatggctcatcttcatgaagatgcattacgtgaatat
gatgagttagagctctgctatttggaaacagttaatatgcccggaaaacagagggaattt
ggaggattcgatagtgaagatgaccaagctacgctgctgaaaccaggaagcaaaccattg
acacagattgtgcaagatgattcttttagagaattcgattttagacagtatctctttgcc
tgtcaatccaggctgttgttcaagttgaatcgtccttctgaagtttcatccaggggttac
tcttttgttatcagttttgcaaaggcgttgaccctccatgagagtgtgctgcccttctgt
ttgcgggaagtttgggtaattactgcgtgtttagcgctgctcgatgcaactgcttctcat
caccatgatggaattgttgcacctgatattgagaaggaattctaccgtcttcagggtgat
ctctattccctcgcacgggttaagttcatgagacttggatatttgataggatatggaaca
gacatagaaaaaagtccactaaacagtgcttgtctcagtatgctgccttggccaaaacct
gcggtctggccatctcttccaccagatgcttcctctgaggtgcttgaaaaagaaaagact
attcttcaagcaacttcaaggaccaagcactttggtattcaacggaaacctttacccctt
gaaccatctgtccttctacgtgtggctaacagaagaagggcttctctttctactggaaat
attcctgaaatatttgatggccgcacaggctttactgaaggatcaggtttagaagcgtct
ccgagaacaccttcatcacttaaagtacaagcacctcccatgtcaagaacaaattcttca
cctggaaattttgaaagtccgctagataggcctatgaggcttgctgaaatttttgttgct
gctgagcatgctctgcggcttaccatttcagatcatgatttgtcgaaggcattgtcatct
actcaggatttcgagcataaatatcttaatctaactaaaggtgctgccgaaaattatcat
cgctcttggtggaagagacatggagtcgttcttgatggtgaaattgcagctgtctgcttc
aagcacgggaaatatgatttggctgcaaactcttatgaaaaagtttgtgctctttatgcg
ggtgaaagatggcaagatttactggcagaagtcttgcccaatctagccgaatgtcaaaag
aatcttaatgatcacgctggatacatgtcatcttgtgttaggctactttccttggataag
ggtttattcgcccccaaggagcggcaagcttttcagatcgaggttgtcaatcttgcacac
agtgaaatggaaaacccagttcccttagatgtgtcgtcattgatcacattttctggaagt
actggccctccgcttcagttgtgcgatggagaccctggaactctattagttactgtgtgg
agtggctttcctgatgatatcacccttgattcgcttagtcttaccttagtagccaccaac
aacaccgacgaaggcggccaggctttaaagagttctgctgcaactgtgctaaagcccgga
aggaataccatcacatttgatctgcctccacaaaaacctggttcttatgtcttgggagtt
gttactggtcagattgggcgcttgagattcaggtctcacagcttttcgaaaggtggtcct
gcagatactgatgacttcatgagttatgaaaagccaaccagacctatcctgaaggtttcc
aaaccaagagctctggttgatcttgcttcagcagtatcttctgcgctgcttataaatgaa
gcacagtggattggtatcatagtacatcctataaattactcactgaaaggcgccatcttg
cacattgacactggtccggggctaaagattgaagactcatacggcattgagatggagaga
tacgtggaaaaagattgtgatgctggtgcatcaaaagccgaagtttctgtagaagatagc
cctgtctctccaaaacaggattcagaggtacttaacctctgcgatggtaaaatagttttc
tcagaatgggcaagcaatgtcagttctattctgtgggtccctgttcgtgcattgagtgag
aagcttgccagaggttcatcttcggtcactccgctgaaacaagatattctagagggaatg
agaactgtagctttaaaacttgaatttgggatgcatcataaccagatatttgagagaacc
gtagcggcacattttaccgacccttttgacgtgactacaagggtggtaaacaaatgcaac
gatggcacgatggtcttgcaggttatgctacactcccttgtcaaggccaacttgatagtt
cttgatgcttggcttgatcttcaagaaggatttgttcatggaaaaagtgagggaagacct
acatcaacattctttccgcttgttgtgtctccagggtctagagcagccgttgtgttcagt
atatccctagagaagacgatgtcctcagggaaagatttgcaactaccagagagcatcctg
aatatcaaatatgaaatcaatggtgatagagccgctggagcacacaaaccagtggatgca
gatcactctggatctgattctgaaaggagagctttggtgttcaagagtgctatcgttttg
cagcgtccagtgcttgatccttgccttacagttggatttctcccacttccttctgatggt
cttagggtggggaaacttattaccatacagtggagagtcgagaggctgaaagaactcaag
ggaagtgaagccgtagaacaacaacatgatgaagtgttatatgaaatcaatgcaaattcg
gagaattggatgattgcgggtaggaagagaggccatgtgtctctctcagaagagaaaggt
tcaagagtagtaatttcgatactgtgtgtcccattagtagcgggttatgtccgtccccct
cagctcagtttgccgaacgtggaagaagaaaacgtaagaagcaatccaccgggtcctcac
ttagtgtgtgtcttgcctccacttctcagttcttcctattgcgtccctgttaagtag
DBGET
integrated database retrieval system
