Brassica oleracea (wild cabbage): 106318596
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Entry
106318596 CDS
T04124
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106318596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106318596
03029 Mitochondrial biogenesis [BR:
boe03029
]
106318596
Membrane trafficking [BR:
boe04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
106318596
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106318596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
106318596
NCBI-ProteinID:
XP_013612090
UniProt:
A0A0D3EEU1
LinkDB
All DBs
Position
C9:47501773..47504373
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AA seq
334 aa
AA seq
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MAANEEAMKYVWEGAIPLQIHLHKSEVASHPAPPPALVLAPRIGYLPLLVPLIKPYFKDS
LPPGEDSIWFDYKGVPLKWYIPTGVLFDLLCAEPERPWNLTIHFRGYPSNVLIPCEGEDS
AKWNFVNSLKEAAYIINGNCKNVMNMSQSDQEDLWTSVMNGDLDAYTRLLPKLKMGNIED
EFSRKESLSSPVSRQGGGTEIDVAGQVKTARIPVRLYVRSVSQNFENLEDVPEIDTWDEI
SYMNRPVEFLKEKGKCFTLRDAIESLLPEYSGDRAQTSGEEEADGSQETRGEIKLVRIQG
IELKLEIPFSWVVNNLMNPEFYLHISVLVIGPQR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaatgaagaagctatgaagtatgtatgggaaggagcaattccgctgcagatt
catctccacaaatccgaagtcgcttctcaccctgctcctcctcctgctctcgtgttagca
ccaaggatagggtacttgcctctgttagttcctctgataaagccttacttcaaggattca
cttcctcctggtgaagactcaatctggttcgattacaaaggcgttcctcttaaatggtat
ataccaacaggtgttctcttcgatctcttatgcgctgaacctgaaagaccttggaatctc
actatacactttaggggatatccgagcaacgtactcattccatgtgaaggagaagattct
gccaagtggaactttgttaactctttgaaagaggcggcatatattatcaatggaaactgc
aagaatgttatgaatatgtctcagagtgatcaagaggatctgtggacttctgtcatgaac
ggtgatcttgatgcctacacaaggttattacccaagcttaaaatgggaaatatcgaagat
gagttttcaagaaaagaaagtttgtcatctccagtatctcgacaaggtggtgggactgag
atagatgtggctggacaagttaagacagcaaggattcctgttaggctgtatgttcgaagt
gtaagtcaaaatttcgagaatcttgaagatgtgcctgagatcgatacatgggatgagatt
tcgtacatgaatcgccctgttgagttcctgaaagaaaaagggaaatgctttactctacgt
gacgctattgaaagtctcctcccggagtacagtggagacagagctcaaacgagtggagaa
gaagaagcagatgggtcgcaggagacgaggggagaaatcaagctggtaaggatacaaggg
atagaattgaaactagagataccgttttcatgggtggtaaacaacttgatgaacccagaa
ttctatctccacatctctgttcttgtgataggtcctcaaaggtaa
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integrated database retrieval system