Brassica oleracea (wild cabbage): 106318787
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Entry
106318787 CDS
T04124
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106318787
Transcription factors [BR:
boe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106318787
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
106318787
NCBI-ProteinID:
XP_013612375
UniProt:
A0A0D3E7J0
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Position
C9:21595096..21599078
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AA seq
587 aa
AA seq
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MAASSSSAASFFGVQQDDQSHLLPPNSSAAAPPLPTHHQPPQSQQPLDAPPQKKKRNQPR
TPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKR
KVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTC
GTKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLTSLPSHHFPYGQNTNNSNNT
SSMILGLSHMGPSQNLDHESGERLRLGSSGGGGAGAASRSSSDLIAANASGYFMQEQNPS
FHDQQDHHQQGFLAASNNIKASPMNFQQSLMQFSHDSHNCPSSNLFNLSFLSGHNGVASA
TSNPNAAAVSSGNLMISNNFDGENAVRGGGGRGGGEGSTGLFPNNLMTSADRISTGAVPS
LFSSSMQNPNSTTHMSATALLQKAAQIGSSSSNNNNSNNASSILRSFGSGMYGESESNLN
DLMNSFSNPGATGNNVNRVDSPSYGGVNKGLNADKQSMTRDFLGVGQIVRSMSESGGFQQ
QKQQQQHGNSTERVGSSSDSADRNSINVNPGGGPASSPPYGIHRASF
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcatcctctgctgcttccttctttggagttcaacaagatgatcaatct
caccttcttcctcctaattcctccgcagccgctcctcctcttcctactcaccaccagcca
ccgcagtctcagcagccccttgatgctccaccgcagaaaaagaagagaaaccaaccaaga
actccaaattccgatgcagaagtgatagctttgtctccaaagacactaatggctacaaac
agattcatatgtgaagtatgcaacaaagggtttcaaagagaacagaatctacaacttcac
cgaagaggacacaatcttccatggaaacttaagcagaaatcgaccaaagaagtgaagagg
aaagtgtatctttgtccggagcccacgtgcgtccaccatgacccgtcacgtgctctcgga
gacctcaccggaatcaagaaacattattaccgtaaacacggtgaaaagaagtggaaatgc
gagaaatgttctaagcgttacgctgttcaatcggattggaaagctcactccaagacttgt
ggtaccaaagaatatcgttgcgactgtggtacactattctcccggcgagacagtttcatt
acacacagagccttttgtgacgcgttggctcaagagagtgcgagacacccaacttctttg
acttctttgccaagtcaccactttccatacggacaaaataccaacaactccaacaatact
tcaagcatgatccttggtttgtcccacatggggccctcacagaatcttgatcatgagtcc
ggcgaacgtctccgactcggaagcagcggaggaggaggtgcaggagccgcctcacgctct
tcctccgatctcattgctgcaaatgcttcgggttacttcatgcaagagcaaaaccctagc
tttcatgatcaacaagaccatcatcaacaagggtttttggctgcaagcaataacatcaag
gcatcaccaatgaactttcaacaaagtctgatgcagttctcacatgatagccataactgt
ccttcttccaatctcttcaatctcagcttcctctctggacacaatggagttgcttctgct
acaagcaacccaaatgctgctgctgtttcatctggcaatcttatgatttctaacaatttt
gatggagaaaatgctgttagaggcggaggtggacgaggaggaggagaaggaagtacaggt
ctcttccctaacaatctgatgacctcggcggacagaatcagcacaggagcagtgccttca
ctctttagctcatcaatgcaaaatcccaattcaacaactcacatgtcagccactgctctt
cttcagaaagctgctcaaattggttcaagctcgagcaacaacaacaatagtaacaatgct
tcatcgattctaagaagctttgggagtggtatgtacggagaaagcgagagtaatcttaat
gatttgatgaactcattctctaacccaggcgcaacgggaaacaacgttaatagagtagat
tctccgtcatacggaggagtgaacaaaggattaaacgctgataaacaaagcatgaccaga
gactttcttggggttggacagatcgtaagaagcatgagtgaaagcggagggtttcaacaa
caaaaacaacaacaacaacatgggaatagtacagaaagagttggctcttcgtcggattcc
gccgatagaaacagcataaatgtgaatcctggtggtggtccagcaagttcaccaccctat
ggaatccatcgtgctagtttctag
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