Brassica oleracea (wild cabbage): 106318806
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Entry
106318806 CDS
T04124
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03008
Ribosome biogenesis in eukaryotes
boe03013
Nucleocytoplasmic transport
boe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106318806
03008 Ribosome biogenesis in eukaryotes
106318806
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106318806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106318806
03009 Ribosome biogenesis [BR:
boe03009
]
106318806
03016 Transfer RNA biogenesis [BR:
boe03016
]
106318806
03036 Chromosome and associated proteins [BR:
boe03036
]
106318806
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106318806
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
106318806
Pre-60S particles
106318806
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106318806
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106318806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Mesothelin
mTOR_dom
Gpr1_Fun34_YaaH
Motif
Other DBs
NCBI-GeneID:
106318806
NCBI-ProteinID:
XP_013612396
UniProt:
A0A0D3EEW5
LinkDB
All DBs
Position
C9:complement(47641915..47650000)
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAEKLRDLSQPIDVAVLDATVAAFFVTGSKEERAAADQILRDLQANPDMWLQVVHILQN
TKSMDTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRSERLYVNK
LNVILVQIVKHDWPAKWTSFIPDLVAAAKTSETICENCMIILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFKLIHELCLYVLSASQRQDLIRSTLSALHAYLSWIPLGYIFESPLLET
LLNFFPVPAYRNLTLQCLTEVAALNFGDFYNAQYIKMYTIFIGQLQTILPPNTNIPEAYS
NGSGEEEAFIQNLALFFTSFFKFHIRVLESTPEFVTLLLAGLEYLINISYVDDTEVFKVC
LDYWNLLVSELFDAHHNSDNPAATVNLMGLQMSFAPGMVDGLGSQVMQRRQLYSNPMSKL
RGLMINRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHDDTEKQM
LRKLNKQLSGEEWAWNNLNTLCWAIGSISGSMAEDQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGESEPFVSELLSGLATTVQDLEPHQIHSFYESVGSMIQAESDPQKRDEYLQR
LMALPNQKWAEIIGQARQSVEFLKDPDVIRTVLNILQTNTSAATSLGTFFLSQISLIFMD
MLNVYRMYSELVSTSITNGGPYASKTSFVKLLRSVKRETLKLIETFLDKAEDQPHIGKQF
VSPMMEYVLADYARNVPDARESEVLSLFATIINKYKATMLDDVPNIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATFCFPALIKLSSQQLKLVMDSIIWAFRHTERNIAETGLNL
LLEMLKNFQHSAFCNQFFRSYFVQIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLAESGA
LTEPMWDVATVSHPYPNNAVFVREYTIKLLSSSFPNMTAAEVTQFVNRLYESSNDPSEFK
KNIRDFLVQSKEFSAQDNKDLYAEEAAAQREQERQRMLSIPGLVAPNEIQDEMVDS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagaagctaagagacttgagccagccgattgacgtcgctgtgctcgatgcc
actgttgccgccttcttcgttaccggatctaaggaagagagagctgctgcagaccagatt
ttgcgggatttgcaagctaatccagatatgtggcttcaagtcgttcacattctacagaac
acaaagagcatggataccaagttctttgctcttcaggttctagaaggtgtgataaagtac
agatggaatgcacttcctgttgaacaacgagatggaatgaagaattacatctcggaggtc
attgtacagctctcgagtaatgaagcgtctttcagatcggagaggctctatgtaaacaaa
ttaaatgtcatcttggttcagattgtgaagcatgattggccggcaaagtggacaagcttc
attcctgatctagttgcggctgctaaaactagtgaaactatctgcgaaaactgcatgatc
attttgaaactcctgagcgaagaggtttttgatttctcaagaggagaaatgactcagcag
aagattaaagagctgaagcagtctctaaacagcgagtttaaactcattcacgagttatgc
ctatatgtcctctcagcttctcaaagacaggatcttatacgttcaacactgtctgcgttg
catgcgtatctttcatggattccgttgggctacatttttgagtctcctttgcttgagaca
cttcttaatttttttcctgtgccagcatacaggaacctcactctacaatgtctgaccgag
gttgcagctctcaatttcggagacttctacaatgcccaatatatcaagatgtacaccatt
tttatagggcagcttcagacaattctcccaccgaatacaaatatccctgaggcatattca
aacggaagtggtgaagaagaagcatttatccagaacctggcactttttttcacttcgttt
ttcaagtttcatatacgggtcttggagtcaacgccagaatttgttaccttattacttgca
ggtctcgaatatctcatcaatatatcatatgttgatgacactgaagtatttaaggtttgt
ttggactactggaacttgttggtttcggagctgtttgatgcgcatcataattctgataac
cctgcggcgactgtgaacctgatgggattgcagatgtctttcgctcctggtatggttgat
ggccttggctctcaagtcatgcagcggcgtcaactttattctaacccaatgtccaaatta
agagggttaatgattaaccgcatggcaaagcctgaagaagtgcttattgttgaagatgaa
aatggtaacatagttcgtgaaactatgaaggacaatgatgttctcgtccagtataagata
atgcgggagacgttaatctacctctcacaccttgatcatgatgatactgagaagcagatg
ttgaggaagctaaacaaacaattaagcggggaggaatgggcatggaacaatttgaataca
ctgtgctgggctattgggtctatttctggatctatggcagaagatcaggaaaatagattt
ttggtgatggtcattcgcgatttgttgaatttatgtgagattaccaagggaaaagacaat
aaagctgtcattgctagcaacattatgtatgtagttggccaatatccaaggttcttaagg
gcacactggaaatttctaaagacagttgtcaataagctttttgaattcatgcacgagaca
catcctggtgttcaggacatggcctgtgatacatttttgaaaattgttcagaagtgcaag
cgtaaatttgttattgttcaggttggagagtctgaaccatttgtatctgaacttctatct
ggccttgcaactactgttcaagatcttgagcctcatcaaattcactcattttatgagtct
gttggtagtatgatccaggcagaatcagatcctcagaagagagatgaatatttacagagg
ttgatggcacttccaaaccagaaatgggcagaaatcataggacaggcacgccagagtgta
gaattcctcaaggatccagatgtgatacgtacagtgcttaatattctacagaccaacact
agtgctgctacttccctaggaacgttcttcttatcccaaatctccttgatattcatggat
atgttgaatgtgtacagaatgtacagtgagcttgtgtcaaccagcattactaatgggggg
ccatatgcttcgaagacatcatttgtaaaactcttacgatctgttaagagggaaacccta
aagctgatagaaacctttctagacaaagctgaagaccaaccgcacatagggaaacaattt
gtgtctccaatgatggaatatgtacttgctgactatgcaaggaatgtgcctgatgctagg
gaatctgaagttctttcactttttgcaacgattataaacaagtacaaggcaacaatgtta
gatgatgtgccaaacatatttgaagctgttttccagtgtacattggagatgataactaag
aacttcgaagattatccggaacaccggctcaagtttttctcgttactccgtgctattgct
acattttgtttcccggccctgataaagttgtcgagtcagcaactgaagctagtgatggat
tccattatctgggcatttagacatactgagagaaatattgctgaaactgggcttaatctt
ttactggagatgctgaagaactttcagcactctgcgttttgtaatcaattcttccggtcg
tacttcgtacaaatcgagcaagaaatatttgctgttttgactgatacttttcataagcct
ggtttcaagctgcatgtgttggtgctgcagcatctgttttgcctggctgagagcggtgct
ttaacggaacctatgtgggatgttgcaactgtatctcacccgtatccgaacaacgccgtc
tttgttcgtgaatatactattaagctgttgagctcttcattccccaacatgactgctgca
gaggtcacacagtttgttaatagactttacgagtcgagcaatgacccgtccgaatttaag
aaaaacatacgtgacttccttgtacagtcaaaggaattttcagctcaggataacaaagat
ctctacgctgaggaagcagctgcgcagagagagcaagagcgtcaaagaatgctttcgatt
cctggccttgtcgctcctaatgagattcaagacgagatggttgactcctaa
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