Brassica oleracea (wild cabbage): 106318912
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Entry
106318912 CDS
T04124
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03420
Nucleotide excision repair
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106318912
09124 Replication and repair
03420 Nucleotide excision repair
106318912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106318912
03400 DNA repair and recombination proteins [BR:
boe03400
]
106318912
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106318912
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
106318912
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106318912
TCR (transcription coupled repair) factors
Cul4-CSA complex
106318912
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106318912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
106318912
NCBI-ProteinID:
XP_013612527
UniProt:
A0A0D3E6T2
LinkDB
All DBs
Position
C9:complement(19142943..19148020)
Genome browser
AA seq
793 aa
AA seq
DB search
MSLPNKRSTCPPAASSASTTDSSYSPPPPMKKSKNGLHTPSDKVPFPMEDEDPTPSAAAN
LSRKKATLPQPTPTKKLVIKLNKAKPTLPTNFEDTTWDNLQSAIRAIFLKKPFSFDLERL
YQAVDDLCLHKLEGKLYERMQKECEEHISAALHSLVGQDTDLSVFLSLVEKCWQDFCDQM
LMIRSIALSLDRKYVIQNPNVRSLWEMGLQLFGKHLSLSPDVEQRTVTALLRMIEKERLA
EAVNRTLLSHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQYDVPEYLKHVEGR
LHEENEKCILYIDASTRKPLISTVEKQLLERHIVAILDKGFTPLMDGRRTEDLQRMYTLF
SRVTALESMRQALSSYTRKTGQKIVMDEEKDKDMVQSLLDFKASLDIVWEDSFCKNESFG
NTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELESTLEKVLVLFRFIQGKD
VFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINES
FKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRR
LMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTGIEDKELRR
TLQSLACGKVRVLQKYPKGRDVQDGDEFDFNDTFTAPLYRIKVNAIQMKETVEENTSTTE
RVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLE
RDKTNPQIYNYLA
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccaaacaaacgctctacttgccccccagccgcttcttctgcctccaccact
gactcttcttactctcccccacctcccatgaaaaagtccaaaaacggcctccacactccc
tccgataaggttcccttccccatggaggacgaagatccaaccccctccgccgcagccaat
ctctcccggaagaaggctacactcccccagcccactcccactaagaagctcgtcatcaag
ctcaacaaagccaaaccaactctaccaacaaactttgaagacactacctgggataatctg
cagtcagctatcagagctatattcctcaaaaagcccttttctttcgacctcgagaggctt
taccaggctgttgatgacctttgcttgcataagctggaaggaaagctttacgaacggatg
cagaaggagtgtgaagagcacatctctgccgctttacattctttagttggccaagacacc
gatctctctgttttcttgtcgctcgttgagaaatgctggcaagatttctgtgaccagatg
ctcatgatccggagcatagccttgtctttggataggaagtatgttatacagaacccgaat
gtacgttcattgtgggagatgggccttcagctttttgggaagcatctttctctgtcccct
gatgttgagcagaggactgttactgctctcttgagaatgattgaaaaagaaaggttagcc
gaagctgttaataggacactactaagccatctcttaaagatgtttactgcactgggaata
tattcggaaagctttgagaaacctttccttgaatgcacttctgaattttatgctgctgaa
ggaatgaaatacatgcagcaatatgacgttcccgagtacctgaagcatgttgagggaaga
ttgcatgaagagaatgaaaaatgcatactgtacatagatgcatcaaccaggaaaccattg
atatcaactgttgaaaagcaacttctcgagcgtcatatagttgctatccttgataagggt
ttcacaccattaatggatggacgtcgtactgaggacctccagaggatgtacacccttttt
tctagggtcactgcacttgaatcaatgaggcaggcgttaagttcctacactcggaaaact
gggcagaagatcgttatggatgaagagaaagataaagatatggtacaatcactattggac
ttcaaggcttctcttgacatagtatgggaagatagcttttgcaagaatgaatcatttggt
aacaccattaaagattcatttgagcatctgataaatctgcgccagaatcgtccagctgaa
cttatcgccaaatttttggacgagaagctccgtgctgggaacaagggtacttctgaagaa
gaattggagagtacccttgagaaagtcctggttttgttcagatttatccagggtaaagat
gtgttcgaagcattctataaaaaggatcttgcaaagagactcctgttgggaaaaagcgct
tccattgatgctgagaaatcaatgatctctaagctcaagactgagtgtggtagtcagttt
acaaacaagcttgaagggatgttcaaggatattgaattgtcaaaggaaatcaacgagtca
ttcaaacaatcgtctcaggccagaacaaaattgccatcaggaattgagatgagtgtccac
gttctaacaacagggtactggccaacatatccaccaatggatgttaaacttcctcatgag
ttaaatgtctatcaggatatcttcaaagagttttatttgagcaagtacagtgggaggagg
ttaatgtggcaaaactcattaggtcactgtgttttgaaggcagatttctccaaaggtaaa
aaggagcttgctgtttccctgtttcaggctgttgtgttgatgttatttaacgatgcaatg
aaacttagctttgaagacattaaagattccactggcatagaggacaaagaactgagaagg
actcttcagtcgcttgcttgtgggaaagttcgtgtcctgcagaagtatcccaagggaaga
gatgtacaagacggggatgaatttgattttaatgacacctttacggctcctctgtatcgc
attaaggtgaatgcaatccagatgaaagagacggtagaagagaacacgagtacaacagag
agagtattccaggaccgacaataccagattgatgcagccattgttcgaatcatgaagacg
agaaaagtcctgagccatactctcctaatcaccgagctcttccaacagctgaagttccca
ataaaacccgcggatctgaagaagaggatagaaagcctgatcgatcgagagtacttggag
agggacaagaccaaccctcagatatataattatcttgcttag
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