Brassica oleracea (wild cabbage): 106318962
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Entry
106318962 CDS
T04124
Name
(RefSeq) dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106318962
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
106318962
Ribosome biogenesis [BR:
boe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
106318962
SSDB
Ortholog
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GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
DUF5703
Radical_SAM_2
Motif
Other DBs
NCBI-GeneID:
106318962
NCBI-ProteinID:
XP_013612592
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All DBs
Position
C9:14601532..14603717
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AA seq
464 aa
AA seq
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MVGLTTTMRRLGIITVTNSAVVTPTPISSTAAFSRNLTLPSPLGNHHLTNSIRLLKSRSL
LSSFSCFSSSSSSSSAAYLPALDEFPSTKASVAVRDDNKKVILKGMSYASLQEWVESHGF
RPGQAMMLWKRLYKDNIWAENPDQLQGLNKDFKRMISEHAEFGALSLKDVRSASDGTRKI
LFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQAV
YARRLLSHEVGSITNVVFMGMGEPFHNIDNVIKAANIMVDENGLHFSPRKVTVSTSGLVP
QLKRFLRECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSRHKYKVLFEY
VMLAGVNDSMEDAKRLVELVQGIPCKINLIQFNPHSGSQFIQTDEDKMIKFRNVLAEGGC
TVLMRFSRGNDQMAACGQLGMLGAIQAPVMRVPEQFRTALKASV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggttggtctgacgacgacaatgaggcggctgggaatcatcaccgtcactaattccgcc
gtcgtcactccgacgccaatctcttcgacggcggctttctccagaaacctgacgttacca
tctcccctcggcaatcaccatcttaccaattccattcgtctcctcaaatcccgaagcctc
ctctcctccttctcatgtttctcttcttcttcttcttcttcttcggcagcttatcttccc
gcactcgacgagttcccatcaactaaagcttctgtggcggtgagagatgataacaagaag
gtgatcttgaagggtatgagttacgcttcgctccaagaatgggttgaatcgcatgggttt
cgaccaggacaagctatgatgctgtggaagagactttacaaggataacatatgggcagaa
aatcctgatcagctccaaggcctgaacaaagatttcaagagaatgattagtgaacatgct
gagtttggggcattatctctcaaggatgttcgttcggcctcagatggaactaggaagatt
ctgttcacgttggatgatgggcttgtgatcgagacagttgttataccttgtgatcgtggc
aggacaacagtctgtgtttcgagccaagtgggttgtgctatgaattgtcagttctgctac
actggcaggatgggtttgaagagaaatctcactgctgctgagatagttgagcaggctgtt
tacgcaaggcggttgctttcccatgaagttggatcaataacaaatgtcgtgtttatggga
atgggagagccatttcacaatattgacaatgttatcaaagctgcaaacataatggtagac
gagaatggacttcactttagtccacgcaaggtcacagtctcgaccagtggccttgttcct
cagctaaagcgtttccttcgtgaatgtaattgcgctttggcagtcagtcttaatgcaaca
accgatgaggttagaaactggattatgcctatcaacagaaaatacaagctatctttgctc
ctggagacgctcagagaagaactcagttcaaggcacaagtacaaagtgttattcgaatac
gtgatgctcgctggagtgaatgacagcatggaagatgcaaagaggctagtggagcttgtg
cagggaatcccatgcaagattaaccttattcagttcaacccacatagtggttctcagttc
atacagaccgatgaagacaagatgatcaagttccgtaatgttctggccgaaggaggctgc
actgttttaatgcggtttagccgaggcaatgatcaaatggctgcatgtgggcagcttggc
atgcttggtgctattcaagcaccagtgatgagggtgcctgagcagttccgcaccgctcta
aaagcatctgtttga
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integrated database retrieval system
