Brassica oleracea (wild cabbage): 106318966
Help
Entry
106318966 CDS
T04124
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.5
KO
K14487
auxin responsive GH3 gene family
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106318966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
106318966
NCBI-ProteinID:
XP_013612597
UniProt:
A0A0D3E0A1
LinkDB
All DBs
Position
C9:complement(1571583..1574490)
Genome browser
AA seq
591 aa
AA seq
DB search
MEPAEAGHADVIGWFEHVSEKACKTQRETLRRILELNSGVEYLRKWLGAVDVEEMDDDTL
ETLFTSLVPIVSHADLDPYIQRIADGETSPLLTQEPITVLSLSSGTTEGRQKYVPFTRHS
SQTTLQIFRLSAAYRSRFYPIKEGGRILEFIYAGKEFKTPGGLTVGTATTHYYSSKEFKT
KQETTKSFTCSPREVISGGDFGQCTYCHLLLGLHFSRQVEFVASAFSYTIVQAFSLFEDT
WRDICVDIKEGSLSSRITLPKMRKAVLALIRPNPSLASLIEDVCAELESNVGWFGLIPKL
WPNAKYVSSIMTGSMLTYLTKLRHYAGGLPLVSADYGSTESWIGVNVDPQLPPEDVSFAV
IPTFSYFEFIPLYRQQTQQDLCSEGDFVEEKPVPLSQVKLGQEYELVLTTFTGLYRYRLG
DVVEVTGFHHGTPKLSFIYRRKLILTINIDKNTEKDLQRVVDKASQLLSRTTQAEVVDFT
SHADVTARPGRYIIYWEIRGEAEDKALEDCCREMDAGFVDHGYVVSRRMKSIGPLELRVV
ERGTFGEVAERCVGKCGGLNQFKTPRCTTNSVMLDILDGSTVKRFSSSAYN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgcagaagctgggcatgctgatgttattggttggttcgagcatgtctcggag
aaagcctgcaagactcaaagggagacgctgcgccggattcttgagctcaactccggagtg
gagtatctgaggaaatggcttggggctgttgatgttgaagagatggacgatgacaccttg
gaaactctctttacttccttggtgcctattgtttcccacgctgatttggatccttacatt
caaaggattgcagatggagagacctctcctttactcactcaagaacccatcactgttctc
tccctcagctctggaacaacagaagggcgacaaaagtatgttccgtttactcgccatagc
tcgcaaactactcttcagattttcagattatcagctgcttacagatcaaggttttatcca
ataaaggaaggagggaggatccttgagtttatatacgccgggaaggagttcaagacacca
ggagggttgacggtaggaacggccacaacgcattactattcaagcaaagagttcaaaacc
aagcaggagacaacaaagtcattcacctgcagcccacgagaggtcatctccggaggcgat
ttcgggcagtgcacgtactgtcatctcctgctcggtctccatttctcgaggcaagtggag
tttgtagcctctgctttctcctacaccattgtccaagccttctccctgttcgaagacacc
tggagagacatatgtgttgacataaaggaaggcagtctcagctcaagaatcactctcccc
aagatgagaaaagctgtgttggctctgatcagaccgaacccgtctctggcatctcttatc
gaagacgtctgcgcagagctggaatcgaacgtgggatggttcggtttgattccgaagcta
tggccaaacgcaaagtacgtctcctcgatcatgacgggctccatgctgacgtatctgacg
aagctgaggcattacgctggtggtttgcctctggtgagcgcggattatgggtcgaccgag
agctggattggtgtgaacgttgatcctcagcttcctccagaagacgtgagctttgctgtg
attccgacttttagctacttcgagtttataccgctttacaggcagcagactcaacaagac
ttgtgtagtgaaggtgactttgtcgaagagaagcctgtgcctctctctcaagtcaagctc
ggacaggagtatgagcttgttctcaccactttcacaggtctttacaggtacagattagga
gacgtcgttgaagtgaccggttttcaccacggcacaccaaagctaagtttcatatacaga
agaaagctcatcttaaccatcaacattgacaagaacacagagaaagatcttcagagggtg
gtcgacaaggcgtctcagcttctgagccgcaccacacaagccgaagtcgtcgactttaca
agccacgcagacgttacagctcgtccaggtcgctacataatctactgggagatcagagga
gaagcagaggataaagctcttgaagattgctgcagagagatggatgctggttttgtggac
catggttacgttgtgtcgaggcgtatgaagtccatcggaccgctagagctacgagtcgtg
gaacgtggcacgtttggggaagtggcggaaaggtgcgttgggaaatgcggtggcttgaac
cagtttaagactcctaggtgcacgaccaactcggttatgcttgacatacttgatggttct
actgttaagagatttagcagttcggcttataactaa
DBGET
integrated database retrieval system
