KEGG   Brassica oleracea (wild cabbage): 106319003
Entry
106319003         CDS       T04124                                 
Name
(RefSeq) geranylgeranyl transferase type-2 subunit beta isoform X1
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:boe01006]
    106319003
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106319003
Enzymes [BR:boe01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     106319003
Prenyltransferases [BR:boe01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   106319003
Membrane trafficking [BR:boe04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    106319003
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    106319003
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_C SQHop_cyclase_N
Other DBs
NCBI-GeneID: 106319003
NCBI-ProteinID: XP_013612647
LinkDB
Position
C9:complement(49980880..49984592)
AA seq 322 aa
MSSSSSTFQMGQLVADKHVRYILMSEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGS
VSVNEVVSWLMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLDILDVGKVSSYVAG
LQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVEKAVDYIVSCKNLDGGFGCTP
GAESHAGQIFCCVGALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
LSSLIMIDRVHWIDKAKLVKFILDCQDLENGGISDRPDDAVDIFHTYFGVAGLSLLEYPG
VKAIDPAYALPVDVINRILLTK
NT seq 969 nt   +upstreamnt  +downstreamnt
atgagttcttcgtcttctaccttccagatgggtcagcttgtagctgacaagcatgtacgt
tacattctcatgtcagaaaagaagaaagagagttttgagtcggtggtgatggatcatctc
agaatgaatggtgcgtactggggactgacaacactagacttactcgacaagcttggctct
gtttccgtaaacgaagtcgtttcatggctcatgacctgccagcacgaatctggtggcttt
gctggaaatactggacatgatccacatgttttatatacactgagtgctgttcaaatcttg
gccctctttgacaaactagacattcttgacgttggaaaagtatcaagctatgtcgctggt
ctgcagaatgaagatggatccttctcaggagatatctggggagaagtagatacgaggttt
tcttacattgccatatgctgtctctcaatattgaaatgtcttgacaaaatcaatgtagag
aaggcagttgattacattgttagctgcaaaaaccttgatggtggttttgggtgcacaccc
ggagctgaatcacatgcaggacagattttctgttgcgtgggtgctcttgctatcaccggg
agcctccatcatgttgataaggacttgctcggttggtggttatgtgaaagacaagtcaag
tccgggggtttaaatggacgacccgagaagctccctgatgtttgctattcgtggtgggtc
ctatcgagcctgatcatgatagatagagttcactggatcgacaaagcaaagcttgtcaag
ttcatcttggattgtcaggatttggagaacggaggcatctcagacagaccggacgatgct
gttgatatcttccacacctactttggagttgcagggctttccctccttgagtatcccgga
gtgaaagcaattgatccagcgtacgctttgccggttgatgtcatcaatcgaattctccta
accaaatga

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