Brassica oleracea (wild cabbage): 106319045
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Entry
106319045 CDS
T04124
Name
(RefSeq) endoglucanase 6-like isoform X1
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00500
Starch and sucrose metabolism
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
106319045
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
106319045
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
CBM49
Motif
Other DBs
NCBI-GeneID:
106319045
NCBI-ProteinID:
XP_013612709
UniProt:
A0A0D3E4A1
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Position
C9:complement(11183856..11187602)
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AA seq
621 aa
AA seq
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MKNFASVAALLLLLCFPVAFSGHDYGQALSKSLLFFEAQRSGVLPRNQRVTWRSHSGLND
GKSSGVNLVGGYYDAGDNVKFGLPMAFTVTMMAWSVIEYGNQLAANGELGHSIDAIKWGT
DYFIKAHPEPNVLYGEVGDGNTDHYCWQRPEEMTTDRKAYRIDPSNPGSDLAGETAAAMA
AASIVFRRSNPAYSRLLLTHAYQLFDFADKYRGKYDSSITVASKYYGSVSGYNDELLWAA
AWLYQASNNQFYLDYLGRNGDSMGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAGRHTA
VFQKFQQKADFFMCSLLGKGSRNIQKTPGGLIFRQRWNNMQFVTSASFLTTVYSDYLTSS
RSYLRCSAGNVAPSQLLSFAKSQVDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSYK
VDRSFVTCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADRRDNYEQTEPATYNNAPL
LGVLARLSSGHSGYSQLLPAAVPAPVVVRRPMPIRKPRVTSPVRASGPVAIVQKMTGSWV
SKGRTYYRYSTTVTNKSPRALKSLNLSIKNLYGPIWGLSRSGNSFGLPSWMHSLQSGKSL
EFVYIHSTTPANVAVSSYTLA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattttgcgtccgtggctgctctgctactgcttctctgttttccagtagctttc
tccggtcatgattacggccaagctctgtctaagagtcttctcttcttcgaagctcagaga
tctggtgtcctccctcgtaaccaaagagtcacttggcgctctcactccggtctcaacgac
ggcaaatccagcggcgtgaatctggttggaggttactacgacgccggggataatgtgaaa
tttggacttccgatggctttcacggtgacgatgatggcgtggagcgtcattgaatacggg
aaccagttagcggccaacggcgagctaggccactccattgatgccattaaatggggtact
gattacttcatcaaagcccatcctgagcccaacgtcctttacggcgaggttggagacggc
aacaccgaccactactgttggcagagaccggaagaaatgacgacggacaggaaagcttac
cggatagatccgagtaatcccgggtcggatctagcgggagaaacagcagctgctatggcc
gcagcttcaatagtcttccgccgatctaaccctgcttactctaggcttctactcactcac
gcctatcagctgtttgatttcgcggacaaatacagaggaaaatacgacagcagcatcacc
gtcgctagtaaatactacggatccgtcagtggttacaatgacgagttactctgggctgcc
gcgtggctataccaagcatccaacaaccagttctacttggattacttgggtcgtaacggt
gactccatgggtggtaccggttggtccatgaccgagtttggttgggacgttaagtacgct
ggtgttcaaacccttgtcgccaagttcttgatgcaagggaaagcaggacgtcacacggct
gtgtttcagaagtttcaacagaaagctgatttctttatgtgctccttgttgggtaaaggc
tcccgaaacattcagaagactcccggtggtttgattttccgacagcgttggaacaacatg
cagtttgtcaccagcgcttccttcttgaccaccgtttactctgattacttaacttcctct
cgaagctacttgagatgctctgctggcaacgtcgctccttcgcaacttctctcctttgct
aaatcacaggttgattatattcttggagataacccgagagctactagctatatggttggt
tacggtaacaacttccctcagagagttcaccaccgtggctcctccatcgtctcttacaag
gttgaccgctcttttgtcacttgccgtggtggttacgccacctggttcagccgtaaaggc
agtgatcccaacctcctcactggtgctatcgtcggcggtcctgatgcttacgacaatttc
gctgacaggagagataactatgagcagaccgagcctgctacttacaacaatgcacccctc
cttggtgttcttgctcgtctcagcagtggtcattccggttacagccagcttcttccagca
gcggttcctgctcctgttgttgtccgaagaccaatgcctattcgtaaaccgagagtgact
tccccggtccgagcttctggtccagtggctatagttcagaagatgacaggttcatgggtc
tcaaagggaaggacttactacagatactcaacaactgtaacaaacaaatcaccaagagct
ctgaaaagtcttaacctttcgatcaagaatctctacggaccaatctggggactctctaga
tcaggaaactcattcggtttaccttcctggatgcactcattgcaatccggaaaatcccta
gagttcgtctacattcactcaacaacgcccgccaatgtcgcggtttcaagctacacgttg
gcttga
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