Brassica oleracea (wild cabbage): 106319107
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Entry
106319107 CDS
T04124
Name
(RefSeq) paired amphipathic helix protein Sin3-like 5 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106319107
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
106319107
REST complex
106319107
Heterochromatin formation proteins
Other heterochromatin formation proteins
106319107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
RB_B
DUF5754
INSC_LBD
Motif
Other DBs
NCBI-GeneID:
106319107
NCBI-ProteinID:
XP_013612796
UniProt:
A0A0D3E5F4
LinkDB
All DBs
Position
C9:complement(14866382..14872062)
Genome browser
AA seq
1050 aa
AA seq
DB search
MKRVREEVYVETNGKPLTIGGGGNTGGLTTGDALSYLKAVKDMFQEKKDKYDTFLEVMKD
FKAQRVDTSGVIARVRVLFKGYDDLLLGFNTFLPKGYKITLPEKKTVDFGEAIEFVNKIK
ARFGSDDRAYKKFLDILNMYRKESKSISDVYQEVTLLFQDHEDLLAEFAHFLPDNSGSGS
AHYPLSGRNAVPGAPVPAMHPRNFEKRIKIRNEYTEHSDQREDGDENLVACSAGQWPGYL
KVGDKEGIQDYENGSKDNGSHKILPSTSNHVAKGINELDLSECAQCSPSYRLLPDDYLIQ
IPSYRNTLGEKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNA
AITRVEALLEKINNNTISIETPICIKEHLSELNLRCIERLYGDYGLDVMDFLKKNSHIAL
PVILTRLKQKQEEWARCRSDFRKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVVE
IKDISDRKHKEDPLHATAVGTKPSFTPDVEFSYTDTQVHADLYQLIKYYCEEICATEQSD
KVKKLWVTFLEPMFGVPSRSQTDETVIDVAKSKDNQEQREAVKDNTRDSSPVSNLKPLTP
PKTPNKESPTIGSSFAQDKLHAGAAMNTEHKVEREEGELSPTESFEHDNSEVYRDNGVES
VQKLPDNVRSNTSPEDDGSKTTLELIEANENASKDIASGSKFCGQVSLDEEHKRAMKCDQ
LGESFSRFSERSLQPVKPLAKHVPVALHDSPNDSRVFYGNDSFYVLFRLHQMLYERILSA
KIHSERKWKAPDPDNTSPDSYTRFMDALYNLLDGSSDNTKFEDECRAIIGAQSYILFTLD
KLVQKFVKHLHAVAADETDTRLLQLQTYEKYRKPGRFFEIVYHENARALLHDQNIYRIEY
SSAQTRLAIQLMNSGNDQPEVTAVAVEPGFANYFQNEFLSLVPDEEKPGLFLKRNKAKMS
GPDESSGMSRAMEGLKIINEVECKMCCSSSKVKYEPNTSDLLYRSKQKKPKLNPNGLDND
KTTPGSSEVWRKTRISRFHTSLNRKRVALP
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggttagagaagaggtctacgttgaaacaaatggtaagcctctaacgattggt
ggaggaggaaacacgggagggctgacaacaggtgatgccttgagctacctcaaagctgtc
aaagatatgtttcaggaaaagaaagacaagtatgacactttccttgaagtcatgaaggac
tttaaagctcagagagttgacacaagtggtgtcatagcgagagtaagagtgttgttcaag
ggctatgatgacttgcttttgggttttaataccttcttgcccaaggggtacaagataacc
cttccggagaagaaaacagttgattttggagaagctattgagtttgttaacaagatcaag
gcgcggtttgggagtgatgaccgtgcatataaaaagtttctagacatcttgaacatgtat
agaaaggaaagcaagtccatctctgatgtttatcaagaggttactctgttgttccaggac
catgaagatctgcttgcggagtttgcccatttcttacctgataattcaggatcaggttct
gctcattaccctctgtccggaaggaacgcagtaccaggtgctccagttcctgccatgcat
ccaaggaattttgagaagagaataaaaatacggaatgagtatactgaacactcggatcaa
cgagaagatggtgacgagaaccttgtggcttgctctgctggtcaatggccaggatacctg
aaggtaggggacaaagagggtattcaagattatgaaaatggcagtaaagacaatggaagt
cacaaaattctaccatctaccagcaaccatgtggccaagggtattaatgaactggatctt
tctgagtgtgcacaatgttctccaagttatcgtctccttccagatgattatcttattcag
atcccaagctacagaaatacactaggtgaaaaggtacttaacgatcactgggtgtctgtc
acatcggggagtgaggactactcattcaaacacatgcgtaaaaaccagtatgaagaaagc
ttgtttcgatgcgaggatgacaggtttgagttggacatgttattagagtctgtgaatgca
gccattacgcgtgtggaagctcttctggagaagatcaacaacaacacaatctctatagag
acaccaatttgtatcaaagaacacttatcagagctgaacctaagatgcattgagcggttg
tacggggattatgggcttgacgtcatggattttctgaagaagaattctcatatcgcctta
ccggtgatactaactcgcttgaagcagaagcaagaagaatgggctaggtgtcgctctgat
ttcaggaaagtatgggctgaagtatatgctaagaaccatcacaagtcactagatcaccga
agcttctatttcaagcagcaggactccaagaatctgagcacaaaaggtttagtggtagag
ataaaagatatcagtgacagaaagcataaagaagatcctcttcatgccactgctgtggga
actaagccctctttcactccagatgtggagtttagttacaccgatacacaagttcatgct
gacctttatcaactaatcaagtattattgtgaagagatatgtgccacggaacagtcggat
aaagtaaagaagctgtgggtaacctttttggagcccatgtttggcgttccttctaggtct
caaactgatgagacagtgatagatgttgcaaagtccaaagacaaccaagagcagcgtgag
gcagtgaaagacaacacccgtgacagttctcctgtctcaaaccttaaaccgctaacacct
ccaaaaacacccaataaagaaagtccaacaataggaagctcttttgcgcaagataaactg
catgctggtgcagcgatgaataccgagcataaggttgagcgagaagagggtgagttatct
cccaccgaaagttttgagcatgacaactctgaggtttatagagacaatggcgtcgagtct
gtgcagaaactgccagacaatgtaagaagtaatacttcccctgaagatgatggaagtaaa
actactctagagttaatagaagcgaatgaaaacgcctctaaagatattgcttcaggaagc
aagttttgtggccaagtttctttagatgaagagcataaaagagctatgaagtgtgaccag
cttggtgaatccttttccagattttcagaacggtctctgcaacctgtaaagccccttgca
aagcatgttcctgtggcactacatgactcccccaatgattctcgagttttctatgggaat
gattcattttatgttcttttcaggcttcatcaaatgttgtacgagagaatactatctgca
aagatacattcagagaggaaatggaaagctccagatccagataacacatctcctgattct
tataccaggttcatggatgccctctataatttacttgatggctcgagtgataacacaaag
tttgaagatgaatgccgagctattattggagcacaatcatatattctcttcacattggac
aagctagttcagaagtttgtcaagcatcttcatgcagttgcagctgatgagacagacacc
aggctactgcagctacaaacatacgagaagtacagaaaaccaggaagattctttgagata
gtgtaccatgagaacgccagagcccttctacatgatcagaacatatacaggattgaatat
tcatctgcacagacccgtctggcgattcaacttatgaacagcgggaatgaccagcctgaa
gttacagctgtagcagtggaaccaggttttgctaattattttcagaatgagtttctttcg
cttgtacctgatgaagaaaagcctggtctatttcttaagaggaacaaggcgaaaatgagc
ggtccagatgaatcttcagggatgtcgcgtgccatggaaggattgaagattatcaacgag
gttgaatgtaagatgtgttgcagttcttccaaggtcaagtatgaaccaaatacatcagat
cttttgtatagaagcaagcagaagaaaccaaaactgaatccaaatgggcttgacaatgat
aaaactactcctggtagcagtgaagtctggagaaaaaccagaatatcacgtttccacaca
agtcttaaccgtaaacgtgttgccttaccttaa
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integrated database retrieval system
