Brassica oleracea (wild cabbage): 106319108
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Entry
106319108 CDS
T04124
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106319108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106319108
Membrane trafficking [BR:
boe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
106319108
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
106319108
NCBI-ProteinID:
XP_013612801
UniProt:
A0A0D3AR52
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Position
C2:24764942..24768343
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AA seq
569 aa
AA seq
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MALVTSVRDYINRMLQDISGMKVLILDSETVSNVSIVYSQSELLQKEVFLVEMIDSISAS
NESMSHLKAVYFVRPTSENVQKLRHQLANPRFGEYHLFFSNLLKDTQIHILADSDEQEVV
QQVQEFYADFVAGDPYHFTLNMAANHLYMLPAVVDPSGLQRYSDRVVDGIAAVFLALKRR
PVIRYQRTSDTAKRIAQETAKLMYQQESGLFDFRRTESSPLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGLQDNKVDLRAIGSLPKDQQVEVVLSSEQDAFFKSNMYENFGDIGMNIKRM
VDDFQQVAKSNQNIQTVEDMARFVDNYPEYKKMQGNVSKHVTLVTEMSKLVEARKLMLVS
QTEQDLACNGGQGAAYEAVTDLLNNESVSDIDRLRLVMLYALRYEKENPVQLMQLFNKLA
SRSPKYKQGLVQFLLKQAGVEKRTGDLFGNRDLLNIARNMARGLKGVENVYTQHQPLLFQ
TMESITRGRLRDVDYPFVGDHFQQGRPQEVVIFMVGGTTYEESRCVALQNSTNSGIRFIL
GGTAVLNSKRFLMDLEEAQRISRSGSHMV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggtaacatccgtgcgcgattacatcaaccggatgcttcaggatatctccggc
atgaaggttctcatactcgactccgaaacggttagcaatgtaagcatcgtgtattcgcaa
tcagagctgctccagaaagaagttttcctcgtggagatgatagattcgatctcggcgtcg
aatgaatcgatgtcgcatctgaaagctgtttatttcgtccgtccgacgtcggagaatgtt
cagaagctgcggcaccagcttgcgaatcctagatttggagaataccatttatttttctcc
aacctgttgaaggatactcagattcatattttggctgattctgatgagcaagaggttgta
caacaagttcaggagttttatgcagactttgttgctggtgatccgtatcatttcactttg
aatatggcagcaaatcacctatatatgctcccagcagttgtcgatccctctggtttgcaa
cgctactccgaccgggttgttgatggaattgcggctgtctttctggcgttgaaacgtaga
cctgtcatcagataccagaggacctctgatactgccaaaaggattgcacaggaaacagct
aaattgatgtatcagcaagaaagcggtctttttgacttcagacgcactgaaagctctccg
ttgctgcttgtaattgacagaagagatgacccagttaccccattactgaatcagtggaca
tatcaggcaatggtgcacgaactcataggacttcaagataataaagtagacttgagagcc
attggaagtcttccaaaagatcagcaagttgaggtggttttatcatcagaacaggatgca
ttcttcaaatcgaacatgtacgaaaattttggggatattggaatgaacatcaagcgaatg
gtagatgactttcagcaggtggctaagagtaaccaaaatatccagaccgtagaggacatg
gccagatttgttgacaactaccctgagtacaaaaagatgcaaggcaacgtctcaaagcat
gtgaccctggttactgaaatgagcaagcttgttgaagcaaggaaactgatgctggtttca
caaacagagcaggacttggcttgcaatggtggccaaggagctgcgtatgaggcagttacg
gatctcttaaacaatgaaagtgtgtctgacatcgaccggctacgtttggtgatgctgtat
gctctgcgctatgagaaagagaatcccgttcagttgatgcaactgttcaacaaattggct
tcacgctctcccaagtacaaacaagggcttgttcaatttctcttgaaacaagccggcgta
gagaagcgtactggtgatctgtttggaaacagagatcttttgaatatagcacgcaacatg
gctcgtggacttaagggggttgagaatgtgtacactcaacatcagccacttttgtttcaa
acaatggagagcataaccagagggagattgcgagatgtggattacccctttgttggagat
cattttcaacagggacggccacaagaggtggtgatattcatggttggtggaacaacgtac
gaggaatcacgctgcgttgctctacaaaactcgaccaactccgggattcggtttattctg
ggcggcaccgcagtgcttaattccaagaggtttctcatggacttggaagaagcacaaagg
atatcaagatcaggtagccatatggtgtga
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