Brassica oleracea (wild cabbage): 106319171
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Entry
106319171 CDS
T04124
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106319171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106319171
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
boe03037
]
106319171
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106319171
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
106319171
Chromatin remodeling factors
SRCAP complex
106319171
INO80 complex
106319171
INO80 complex (yeast)
106319171
SWR1 complex
106319171
ASTRA complex
106319171
Cilium and associated proteins [BR:
boe03037
]
Motile cilia and associated proteins
Dynein assembly factors
106319171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_19
AAA_16
AAA_18
Mg_chelatase
bpMoxR
AAA_25
Cdc6_lid
DnaB_C
GvpD_P-loop
TsaE
AAA_7
Zeta_toxin
IstB_IS21
AAA_11
nSTAND3
AAA_28
NPHP3_N
Rad17
Motif
Other DBs
NCBI-GeneID:
106319171
NCBI-ProteinID:
XP_013612873
UniProt:
A0A0D3EDE8
LinkDB
All DBs
Position
C9:44222844..44225741
Genome browser
AA seq
458 aa
AA seq
DB search
MEKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIPLAAGFVGQLEAREAAGLVVDMIK
QKKMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKETKDVYEGEVTELSPEETESLTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGVCNVRGTDMPSPHGVPIDLLDRL
VIIRTQIYNPSEMIQIIAIRAQVEELTVDEECLVVLGDIGQRTSLRHAVQLLSPASIVAK
MNGRDNICKADIEEVTSLYLDAKSSAKLLHEQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtaaagatcgaggagattcagtccaccgcgaagaaacagcggattgccact
cacactcacatcaagggtcttggcctcgagccaaccggaatccctataccattagcggct
ggattcgtgggtcaacttgaggctagagaggcagctggtcttgtagtggacatgatcaag
cagaagaaaatggctggcaaggctcttctgctcgctggacctccggggacagggaaaaca
gcgttggctcttggaatatcccaagagctgggtagtaaggttcccttctgtccaatggtt
ggatctgaggtttactcatcagaggttaagaagactgaggttctcatggagaattttagg
cgtgccattgggttacgtattaaggaaaccaaagacgtctacgaaggagaggttacggag
ctgtccccagaagaaactgaaagtcttaccggaggttacggcaaaagcatcagtcatgtt
atcattggactcaagacagtcaaaggaaccaaacaacttaagctggatcccactatctac
gatgccttgattaaggagaaggtagctgtaggagatgttatatacattgaagcaaacagt
ggagctgtaaagcgggtgggtagaagtgatgcttttgccactgagttcgatctggaagca
gaagaatatgttccacttcccaaaggagaggttcacaaaaagaaagagatagtgcaggat
gtgacgcttcaagacctggacgcagcaaatgctcgacctcaaggcgggcaggatatactt
tctttgatgggccaaatgatgaaaccccggaagactgagatcactgataagctgcgccaa
gaaattaacaaggtggtgaaccgttatatagatgaaggtgttgcagagcttgttcccgga
gttctatttatcgacgaggttcatatgcttgatatggagtgcttttcttacttaaaccgt
gctcttgagagctcgctatctccaatagtaatattcgcaacaaacagaggagtttgcaac
gtaagagggactgatatgccgagtccccatggagtccctattgacttgttggatcggttg
gtcataatcaggacccaaatctataacccttctgaaatgatacagattatagctatccgt
gcgcaagtagaagagctaacagtggatgaggaatgcttggtcgtacttggggacattggg
caaagaacatccttaaggcacgcagttcagcttctgtctcctgccagcatcgtagcgaaa
atgaatggacgtgacaacatttgcaaggctgatatagaggaagtaacatcactctacctt
gacgccaaatcatcagcaaagcttttgcacgagcagcaagagaaatacatctcatga
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