Brassica oleracea (wild cabbage): 106319234
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Entry
106319234 CDS
T04124
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106319234
Transcription machinery [BR:
boe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
106319234
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Response_reg_2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
106319234
NCBI-ProteinID:
XP_013612963
UniProt:
A0A0D3E1H4
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Position
C9:3962564..3966151
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AA seq
503 aa
AA seq
DB search
MGVVFISSSAARSPLGLSTDLLTHRSTLKKLPSVVAFKADESTNSSLIVPPEQEKQKEKR
VVTRRKPCKDQNSAPSCSLGVDYNEAAARLESIYKLSPPATSLEEDVIDASKGKVSRRRK
RKESDGGEEKKVVVRSNVKKEKRLNLDKRIALKRNIQEKPVIVSAQKKVTKRQQEEEKIE
RLVRDYSASNDVVSLDWKKMKIPHVLSSTEHTWLFKLMQPMKALLEVKDELQKSLGREPR
EAEIAGEINMSVAEVKMKIKVGKAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQA
GMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKAKM
ELLFELGRLPTEEEVVERLKISPERYREVLRAAKPVYSLNTKHSVTQEEFINGITDVDGV
GADNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK
HEVKALMKLKHQARVDYLRQYII
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgtttatttcaagctcagctgcaagatctcctctcgggttaagcaccgat
cttttaacacaccggtccacactcaaaaagctgccatccgttgttgcgttcaaagcagat
gagtccaccaactcatctttgatcgttcctcctgaacaagagaagcagaaggagaagaga
gttgtaactaggagaaagccctgtaaagaccaaaactcggctccttcgtgttccttagga
gtggattacaatgaagctgctgctagactagaaagcatttacaagcttagccctcctgca
acatccctcgaggaggatgttatcgatgcttctaaagggaaagtttcacggaggaggaag
aggaaagagagtgacggcggcgaagagaagaaagtagttgtgaggagtaatgtgaagaag
gaaaagagactgaatcttgataaacggatcgcgttgaagagaaacattcaagagaaacca
gttattgtctctgcgcagaagaaagtaacaaagaggcagcaagaggaggagaagatcgag
aggctcgtgagagactattcggcttctaatgatgtagtcagcttggactggaagaaaatg
aagatacctcatgttctttcttccacagaacatacttggttgtttaagttgatgcaacct
atgaaggctcttcttgaagtgaaagatgaactgcaaaagagtctgggaagagagcctagg
gaagctgaaatagctggagagatcaatatgagtgtggctgaagtgaaaatgaaaatcaaa
gttggtaaagctgcaaggaacaaacttattaagcacaatctccgtcttgtcctgtttgtt
atgaacaaatactttcaagatttcaccaacggaccgaagttccaagacctctgtcaagcc
ggtatgagagggcttatcacagctattgaccggtttgaaccgaaaaggaagtttcgtctt
tctacttatggtttgttttggattagacatgccatcatacggtctatgacaacctcgaac
ttcactcgtgtcccatttggacttgaatcggttagagtggagatctataaagcaaagatg
gagctattgttcgagctgggaagactacctacagaggaagaggttgttgagagactaaag
atatcacctgagagataccgtgaagtgttgagagccgcgaaaccggtttactcgctgaac
acaaaacattcggttactcaagaagagttcatcaatggaatcacagatgttgatggtgta
ggagctgataacaggagacaacctgctcttctcaggctagctcttgacgatgtgctggat
tcattgaagcctaaagagagtcttgttatccgacaaagatacggtcttgatggtaaagga
gacaggacgctaggagagatagctggaaatctcaacatctccagagaaatggtgaggaaa
catgaagtcaaggccttgatgaagctcaagcatcaagctcgtgttgattacctccgtcaa
tacatcatctga
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