KEGG   Brassica oleracea (wild cabbage): 106319316
Entry
106319316         CDS       T04124                                 
Name
(RefSeq) U3 snoRNP-associated protein-like YAO
  KO
K14793  ribosomal RNA-processing protein 9
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:boe03009]
    106319316
Ribosome biogenesis [BR:boe03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    106319316
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_EML WD40_Gbeta Beta-prop_WDR90_POC16_2nd EIF3I DSE1_N Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR41 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_DCAF12 ANAPC4_WD40 ASA1 Beta-prop_NOL10_N CFAP251_N Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_RFWD3 Ge1_WD40 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_SCAP OmpH TRM82_WD Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 106319316
NCBI-ProteinID: XP_013613053
UniProt: A0A0D3E800
LinkDB
Position
C9:22995715..22998166
AA seq 481 aa
MKYPKGGSIKRGGKKGSNDRDPFFEQETKERRKVSYDDEDIESIESDAEENGFAEDKREA
EDEDEFADETAGEKRKRLAEALLKRTREARQREREERDDDDDDDIVKTLMKKQQEETGRV
RRAIASRVQEPLSSDGFSVIVKHRHSVVSVALSDDDTRGFSASKDGTILHWDVSSGEKEI
YKWPSDETLKSHGMKVREPRNKKHSRATLALAVSSDGRYLATGGVDRHIHIWDVRTREHV
QAFPGHRNTVSCLCFRNGSTELYSGSFDRSVKAWNVEDKAFVQDSFGHQDDVLAIDALRK
ERAISVGRDRTMQLHKMPEQARMMYRAPASSLESCCFISDTEYLSGSDNGTVALWGMLKK
KPIFLLKNEHSVTINENGDHDNVEYNNSCTASSWVSSVAVCRGSDLAASGAGNGFVHLMA
VEATALRPLFKLPLSGYVNSMAFAKSGKFLIAGVGQETRFGRWGCLKSAQNGVAIHPLRL
S
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgaagtacccaaaaggtggaagcatcaagagaggcggtaaaaagggttcgaatgacagg
gatccattcttcgagcaagagacgaaggaacgcaggaaagtcagttacgatgacgaagac
atcgagtctattgaatccgacgccgaagagaacggatttgcggaagataagagagaagcg
gaggatgaggacgagtttgccgatgagacggcgggagaaaaacggaagaggttagcggaa
gcgttacttaaacgaaccagagaagctaggcagagagagcgtgaagaacgtgatgacgat
gatgatgatgatattgtcaagactttgatgaagaagcagcaggaggaaactggtagggtt
cgaagagccattgcatcgagggttcaggagccacttagtagcgatgggtttagtgttata
gtcaagcacagacattctgttgtgtcggttgctctgtctgatgacgacacaagaggcttc
tcagcttcgaaagacggtactatcctccactgggatgtatcctctggggaaaaggagata
tacaaatggccaagcgatgagactctcaagtctcatgggatgaaagtgagggagcctcgg
aataagaaacacagcagggcgactcttgctttagctgttagctcggacggtcgttacttg
gctactggaggagttgatcgtcatattcatatatgggacgtgcggaccagagaacatgtc
caggcctttccaggtcacaggaatacagtttcgtgtctatgtttcagaaacgggtctacg
gagctctattccggttcgtttgatcgtagtgtcaaggcgtggaatgtagaagataaagct
tttgtacaggacagttttggacaccaggatgatgtcctagccatcgatgcgctaaggaag
gagcgtgcaatttcggttggaagagacagaaccatgcaattacacaagatgcctgagcaa
gctcgtatgatgtaccgtgcacctgcatcgtctcttgagagctgctgtttcatcagcgat
actgagtacctgtctggttcggataacggaactgttgcactttggggcatgttgaaaaag
aaaccaatatttctccttaagaatgaacattccgttaccattaatgaaaatggtgatcat
gataatgtggagtataataactcatgcacagcaagttcttgggtcagttcagttgctgtt
tgtagaggtagtgatcttgctgcatctggagctggtaatggttttgtgcatttgatggct
gttgaagcaactgcccttcgacctttattcaagcttcctctgtctggatatgtgaattct
atggcttttgcaaaatccggcaagtttctgatcgccggtgttggacaggaaacgagattt
ggaagatggggatgcttaaagtctgcgcagaacggcgtcgctatacatcctttaaggctg
tcatga

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