Brassica oleracea (wild cabbage): 106320136
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Entry
106320136 CDS
T04124
Name
(RefSeq) protein LST8 homolog
KO
K08266
target of rapamycin complex subunit LST8
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106320136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106320136
Membrane trafficking [BR:
boe04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
106320136
mTORC2 complex
106320136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_DCAF4
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_2nd
PROPPIN
Beta-prop_IP5PC_F
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
eIF2A
Beta-prop_WDR35_TULP_N
VPS8_N
Beta-prop_VPS8
Mala_s_1-like
Beta-prop_WDR19_2nd
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
106320136
NCBI-ProteinID:
XP_013613955
UniProt:
A0A0D2ZRC7
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MSQPCVVLATASYDHTIRFWEAESGRCYRTIQYPDSHVNRLEITPDKRHLAAACNPHIRL
FDVNSNSPQPVMTYDSHTNNVMAVGFQCDGKWMYSGSEDGTVKIWDLRAPGCQREYESVA
AVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTPVRSLTVMWDGTMVVAA
NNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNV
DGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC
CALHD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagccatgtgtggttctcgcaacagcgagctacgatcacacgatccgattctgg
gaagccgagagcggtcgctgttaccgcaccattcagtatcctgactcgcatgtgaatagg
cttgagataaccccagataagcgtcatctagctgcagcttgtaatcctcatatacgtctc
tttgatgtcaattccaacagccctcaacctgtgatgacgtatgattcacacaccaacaat
gttatggcagtggggttccagtgtgatgggaaatggatgtattctggatcagaggatggt
actgttaaaatctgggacttgagggctccaggttgccaaagagagtatgagagtgttgcc
gctgttaacactgttgttttacacccaaatcagactgagctgatatctggagaccaaaac
ggcaatatccgtgtatgggatctcagagcgaattcgtgtagctgtgaactggtaccagaa
gttgatacacctgtacgctctctaacggttatgtgggatgggactatggttgttgctgct
aacaaccgtggaacatgttatgtttggcgcttgttgcgcggaaaacagacgatgacagag
tttgagccacttcataagctgcaagctcataacggccacatccttaaatgtctactctct
cccgcaaacaaatatctagcgactgcatcatctgataaaactgtcaaaatatggaacgtc
gatggtttcaaactagagaaagtcttaacaggacaccaaagatgggtatgggactgcgtc
ttctcagtggatggagagtttcttgtaacagcatcatcggacatgacggctagattgtgg
tctatgccagcgggaaaagaagtcaaggtgtaccaaggtcatcacaaagccaccgtgtgt
tgtgccctccatgattaa
DBGET
integrated database retrieval system