Brassica oleracea (wild cabbage): 106320211
Help
Entry
106320211 CDS
T04124
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106320211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106320211
03009 Ribosome biogenesis [BR:
boe03009
]
106320211
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106320211
Spliceosome [BR:
boe03041
]
Complex A
U1 snRNP components
U1 related factors
106320211
Complex B
106320211
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Helicases
106320211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
106320211
NCBI-ProteinID:
XP_013614031
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MAAAVRYAPEDHSLPKPWKGLVDDRTGYLYFWNPETNVTQYERPPKLLSVSSSVHTCSIP
NGSSYVPAKDDDDDVQYRNGGPKVVDSGSRFTEVARSGANGAANGLGNSSARGPPPPSSA
PANDDDVSSEAYSRRHEITVSGGQVPPPLMSFETTGFPPELLREVLTAGFSAPTPIQAQS
WPIAMQGRDIVAIAKTGSGKTLGYLIPGFMHLQHIRNDSRMGPTILVLSPTRELATQIQD
EAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQVSYL
VLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNV
DELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNITRQFG
AAAIHGDKSQPERDSVLNQFRSGRTPVLVATDVAARGLDVKDIMAVINYDFPIGVEDYVH
RIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGADQKVPPQIREMAARCGGGGMNKFS
RWGPPSGGRGRDSGYGGRGSSFGSRDSGMGSRSSNGWGRERERSRSPERFNRVPPPSSNG
SPPRSFHEAMLKHR
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcagtccgttacgcacctgaggatcattctcttcccaagccttggaaaggc
cttgtcgatgatcgaactggatacttgtacttttggaatcctgagaccaacgttactcag
tatgagagacctcccaagctgctctctgttagctcttccgttcacacttgttccatacca
aatggtagtagctatgtccctgccaaggatgatgatgatgatgttcagtaccgtaacggt
ggacctaaggttgttgattctggctccaggtttactgaggttgccaggagtggagcgaat
ggtgctgctaatggacttgggaattcctctgcaagaggtcctcctcctccttcatcagct
ccagcaaatgatgatgatgtttcctccgaggcctattcccgccgtcatgaaattactgtc
agtgggggccaagttccaccacctctaatgtcctttgaaactactggttttcctcctgag
cttctgcgtgaggtactcactgcaggtttctctgctccaactccgattcaagctcagtcg
tggccaattgcgatgcaaggtagggacatagtagccattgctaaaaccggctcgggaaaa
actttgggttacttgattcctggcttcatgcatcttcaacacatccggaatgattcgaga
atgggcccaacaatcttggtattgtctccaacgagggagctggccacacaaatccaagac
gaagctgttaaatttgggaggtcgtcaagaatttcctgtacgtgcttgtatggtggtgca
ccaaaaggtcctcagctgagggatttagaaagaggagcagatatcgtggttgcgactcct
ggacgattgaacgatatccttgagatgaggagaataagtctgcgccaagtatcttatctt
gtgctagatgaggctgatagaatgttggacatgggtttcgaaccgcagataaggaagatt
gtgaaagagattcccactaagcgtcaaacacttatgtacacagctacatggccaaaggga
gtcaggaaaattgcagctgacttgcttgttaaccctgctcaggtcaacattggcaatgtt
gacgagcttgtggctaacaagtcgatcacgcagcacattgaagtggtagcaccgatggag
aaacagaggaggttagagcagatattgaggtctcaggaaccaggatcaaaggtgataata
ttctgctcaaccaaaaggatgtgtgaccaactaactcgcaatataacccgccaatttgga
gctgctgctatacatggagacaagtcgcagcctgagagagacagtgttctgaatcaattc
cgcagtggcaggactccggttcttgttgcaactgatgttgctgctcgtggactggacgtc
aaggacatcatggcggtcataaactatgatttccccattggagtggaagactatgttcac
agaatcggaagaacaggaagagctggagcgactggtcaggcattcacattctttggcgat
caagactcgaagcatgcttcggatctgatcaagatcctggaaggagcagaccagaaagtt
cctcctcagatccgcgaaatggctgcccgttgtggtggtggtggaatgaacaaattcagc
cgttggggtcctccttctggaggtcgtggcagagactctggttatggtggcagaggtagc
agcttcggttcacgtgacagtggaatgggaagcagaagcagtaatggatggggaagagag
cgcgaaaggagtcgtagcccggagcgattcaacagagttccaccaccgtcttccaatgga
tctcctcctcgcagcttccacgaggccatgttgaagcacagataa
DBGET
integrated database retrieval system
